Manihot esculenta (cassava): 122723265
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Entry
122723265 CDS
T05761
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
122723265
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
122723265
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarbopepD_reg_2
CarboxypepD_reg
Y_Y_Y
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
122723265
NCBI-ProteinID:
XP_043810979
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Position
3:complement(8720353..8724368)
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AA seq
675 aa
AA seq
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MGKMHLLAGSNWPAIGLCFFFFFLIASSAKIPTSKIPSTTKKSSALGVQLQVTDKQVVID
NGIVQVNFSSPGGDVIGIKYKEMDNVLETKNYENNRGYWDVVWSRPRDSNIFDKVQATKF
SIIVQNEDQVEISFSKIWSPSMDKTTVPLKVDKRYIVRRGSSGLYLYAVMERLKGWPDVD
MDQIRVVFKLQSEKFHYMAISDDRQRVMPMPQDRTTGQPLAYPEAVLLTNPVNPQQKGEV
DDKYQYSCENKDNKVHGWISNDPPVGFWMITPSNEFRDAGPVKQDLTSHVGPIVLNMFGS
VHYAGKDLNTEYRNGEPWKKVFGPVYVYLNSIPPSENPKALWEDAKRQMSTEVKSWPYNF
PRSEDFPSSDQRGNVVGQLVVRDPYINEKLIDASLAYVGLAAPGAVGSWQTEVKGYQFWT
QADKKGSFSIKNIRAGKYSLYAFVPGFLGDYKYNVDVIIQPGSEIKLGVLTYDPPRNGTT
LWEIGIPDRTASEFYVPDANPTLVNKLYIDSPANKFRQYGLWERYTDLYPKNDLIYTVGV
SNYAKDWFFAHVNRKVGNTAYKATTWQIIFELKSVMQSGSYTLQIALASATNSELQVRFN
NANVKRPLFTTRLIGKDNAIARYGIHGLYWFYSIQVPASQLLQGKNTIYLTQTRNGSPFS
GIMYDYIRLEAPTKA
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagatgcatttgcttgctgggtctaactggcctgctatcggtctttgctttttc
ttcttcttccttattgcttcctctgcgaagatcccaacaagtaaaattccaagtacaact
aaaaagagctcagctcttggggtgcagctacaagtaactgataagcaagtggtgattgat
aatggaattgtccaagtcaatttctctagtccaggcggtgatgttatcggaattaaatat
aaagaaatggataacgtacttgaaaccaagaattatgaaaataatcgaggatactgggat
gtggtatggagccgacctagagattctaacatctttgacaaggtacaagctacaaagttt
agtattatagtgcaaaatgaagaccaagtagagatttcgttctctaagatatggagccct
tcaatggataaaaccacagttcccttgaaggtagacaaaaggtacatagttcgacgtgga
agctcagggctttatctgtatgctgtaatggaacgcttaaaagggtggcctgacgttgat
atggatcaaattagagtggttttcaaacttcaaagtgaaaagtttcactacatggcaata
tccgatgataggcagagagtaatgccaatgcctcaagatcgcaccactggccaacctcta
gcctatcctgaagctgttcttttaacaaatccagtcaaccctcaacaaaaaggagaggtg
gatgataaataccagtactcttgtgagaacaaagacaacaaggtgcatgggtggatatca
aatgacccaccggttggattttggatgatcacacccagtaatgaatttcgcgatgctggc
cccgtcaagcaagacctaacctctcatgtggggcctattgttctcaatatgtttggtagt
gttcattatgctgggaaggacttaaatacagagtatcgaaatggagagccatggaagaaa
gtttttggccctgtttacgtctatcttaattctattccgccttctgaaaatcccaaagcc
ctttgggaagatgctaaaagacaaatgtcaactgaagttaaaagctggccatataatttt
cctcgatctgaagatttcccttcttctgatcaacggggaaatgtcgtaggtcaattagta
gttcgtgacccatacatcaatgaaaaattgattgatgcaagtttagcttatgtgggattg
gcagcaccaggtgctgtgggctcatggcaaacagaagtaaagggttaccaattttggact
caagctgacaagaaaggaagtttctcaattaaaaatatcagagctgggaaatatagttta
tatgcatttgttcctggttttcttggagattacaagtataatgttgatgtcattattcaa
ccaggatctgagatcaaattgggtgtacttacatatgatcctccaagaaatggtacaact
ctttgggaaattggcattcctgatcgtactgcttctgaattctatgtaccagacgcaaac
ccaacactcgtcaacaaattgtatattgatagcccagcaaacaaatttagacaatatgga
ttgtgggaaagatatactgatctataccctaagaatgatctcatatataccgttggtgtt
agtaattatgctaaagattggttcttcgcccatgttaacagaaaggttggaaatacggca
tataaggcaactacatggcagatcatatttgaacttaaaagtgtaatgcaaagtggaagt
tacactttgcaaatagccttggcatcagctactaattctgaacttcaggtgaggttcaac
aatgccaatgtcaaacgacctcttttcacaacaaggctaataggcaaggataatgctatt
gcaagatacggaattcatggtttatattggttctatagcattcaagtaccagcttctcaa
cttctccaaggaaagaatacaatttatcttactcagactagaaatggaagcccttttagt
ggtattatgtatgattatattcgtttagaagcaccgacaaaagcttaa
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