Manihot esculenta (cassava): 122723292
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Entry
122723292 CDS
T05761
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
122723292
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
122723292
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarbopepD_reg_2
CarboxypepD_reg
Y_Y_Y
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
122723292
NCBI-ProteinID:
XP_043811011
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Position
3:complement(21455701..21462564)
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AA seq
680 aa
AA seq
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MGKMHLLVGSSWPAIVLCFFFFFFIASSANIPARKVPSRTNNNPALGVQLQVTDKQVVVD
NGIVQVTFSNPGGDVIGIKYKTIDNALEIKNKEDNRGYWDVVWNRPGESNIFDKLQATKF
SIIVQNNDRVEISFSKIWSPSMDKTIVPLKVDKRYIVQRGSSGLYLYAIMERLKGWPDVD
MDQIRVVFKLQSKKFHYMAISDDRQREMPMPQDRVTGQPLAFPEAVRLTNPVNPKQKGEV
DDKYQYSCENKDNKVHGWISNDPPVGFWMITPSNEFRDAGPVKQDLTSHVGPIVLNMFGS
VHYAGKDLNAAYRNGEPWKKVFGPVFVYLNSVPSVNPKALWEDAKRQMSTEVKSWPYNFP
RSQDFPSSGQRGNVVGRLVVREQYINKRSMDASFAYVGLAAPGVAGSWQTEAKGYQFWTQ
ADKKGSFSIKNIRAGKYSLYAFVPGFIGDYKYNVDIIIQPGSNIKLGVLTYDPPRNGPTL
WEIGIPDRTAAEFYIPDPNPTLINKLYINSPANKFRQYGLWDRYTDLYPKNDLIYTVGVS
NYAKDWFYAHVNRRVGNMAYEATTWQIIFELKSAKLSGSYTLQIALASATNSELQVRFNN
AKAKRPLFTTRLIGRDNAIARMGIHGLYWLYSIQVPSTQLLQGKNIIYLTQSRKGSPFNG
IMYDYIRLEAPPPSNSTPLS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaatgcatttgcttgtggggtctagctggcctgctatcgttctttgcttcttc
ttcttctttttcattgcttcctctgcgaatatcccagcaagaaaagttccaagtagaact
aataacaacccagctcttggggtgcagctacaagtaactgataagcaagtggtggttgac
aatggaattgtccaagtcactttctctaatccaggaggtgatgttattggaattaaatac
aaaacaatcgataatgcacttgaaatcaagaacaaagaagataatcgaggatactgggac
gtggtatggaaccgacctggagagtctaacatctttgacaagctgcaagctaccaagttt
agtattatagtgcaaaataatgaccgagtagagatttcattctctaagatttggagccct
tcaatggataaaaccatagtccctttgaaggtagacaaaaggtacatagttcagcgtgga
agctcaggactttatttgtatgccataatggaacgcttgaaagggtggcctgacgttgat
atggatcaaattagggtggttttcaagcttcagagtaaaaagtttcactacatggcaata
tccgatgataggcaaagagaaatgccaatgcctcaagatcgtgtcactggccagcctcta
gcctttcctgaagctgttcgtttaaccaatccagtcaaccctaaacaaaaaggggaggtg
gatgacaaataccaatactcttgtgagaataaagataacaaggtacatggatggatatca
aatgatccaccagtcggattttggatgatcacacccagtaatgaatttcgcgatgctgga
cctgtcaagcaagacctgacctctcatgtggggcctattgttctcaatatgtttggtagt
gttcattatgctggaaaggacttaaatgcagcatatcgaaatggagagccatggaaaaaa
gtttttggccctgttttcgtctatcttaattctgttccttctgtaaatcccaaagctctc
tgggaagatgctaaaagacaaatgtcaactgaagttaaaagctggccatataattttcct
cgatctcaagatttcccttcttctggtcaacggggaaatgttgtaggtcgattagtagtt
cgtgagcagtacattaataaaagatcgatggatgcaagttttgcttatgtgggattggca
gcgccaggtgttgcgggctcatggcaaacagaagcaaagggttaccaattttggactcaa
gctgataagaaaggaagtttctcaattaaaaacatcagagctgggaaatatagtttatat
gcatttgttcctggttttattggagattacaagtataatgttgatatcattattcaaccg
ggatctaatatcaaattgggtgtccttacatatgatcctccaagaaatggtccaactctt
tgggaaataggcattcctgatcgtaccgctgctgaattctatataccagacccaaaccca
acactcatcaacaaattgtatattaatagcccagcaaataaatttagacaatatggattg
tgggacagatataccgatctatatcctaagaatgatctcatatatacagttggtgttagt
aattatgctaaagattggttctatgcccatgttaatagaagggtaggaaatatggcatat
gaggcaactacatggcagatcatatttgaacttaaaagtgcaaagctaagtggaagttac
actctacaaatagccttggcatcagctactaattctgaacttcaggtgcggttcaacaat
gccaaagctaaacgacctcttttcacaacaaggctaataggcagggataatgctattgca
agaatgggaattcatggcttatattggttgtatagcattcaagtaccaagtactcaactt
ctccaaggaaagaatataatttatcttactcagtctagaaagggaagccctttcaatggc
attatgtatgattatattcgtttagaagcaccgccaccttctaactcaactcctttaagc
tga
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