Manihot esculenta (cassava): 122723293
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Entry
122723293 CDS
T05761
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
122723293
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
122723293
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RVT_1
CarbopepD_reg_2
CarboxypepD_reg
Y_Y_Y
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
122723293
NCBI-ProteinID:
XP_043811012
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Position
3:complement(21469510..21477000)
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AA seq
781 aa
AA seq
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MVGSTVKVYVDDMMVKSRSLEDHPEDIQKVFDVLNKAGMKLNHEKCTLRVKDGKFLGSFP
IMLGQKMSHVLQTFKRQRYVPRKAMKAQVLADFIAKMTPPLEPLESPESTIEERKKVLHT
AMAAICYRRGRLGNPKGYSRRKVPSRTNNNPALGVQLQVTDKQVVVDNGIVQVTFSNPGG
DVIGIKYKTIDNVLEIKNKEDNRGYWDVVWNRPGESNIFDKLQATKFSIIVQNNDRVEIS
FSKIWSPSMDKTIVPLKVDKRYIVQRGSSGLYLYAIMERLKGWPDVDMDQIRVVFKLQSK
KFHYMAISDDRQREMPMPQDRVTGQPLAFPEAVRLTNPVNPKQKGEVDDKYQYSCENKDN
KVHGWISNDPPVGFWMITPSNEFRDAGPVKQDLTSHVGPIVLNMFGSVHYAGKDLNAAYR
NGEPWKKVFGPVFVYLNSVPSVNPKALWEDAKRQMSTEVKSWPYNFPRSQDFPSSGQRGN
VVGRLVVREQYINKRSMDASFAYVGLAAPGVAGSWQTEAKGYQFWTQADKKGSFSIKNIR
AGKYSLYAFVPGFIGDYKYNVDIIIQPGSNIKLGVLTYDPPRNGPTLWEIGIPDRTAAEF
YIPDPNPTLINKLYINSPANKFRQYGLWDRYTDLYPKNDLIYTVGVSNYAKDWFYAHVNR
RVGNMAYEATTWQIIFELKSAKLSGSYTLQIALASATNSELQVRFNNAKAKRPLFTTRLI
GRDNAIARMGIHGLYWLYSIQVPSTQLLQGKNIIYLTQSRKGSPFTGIMYDYIRLEAPIK
A
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggtgggttcaaccgttaaagtgtatgtagatgacatgatggtaaaaagccgatcatta
gaagaccatccagaagatatccaaaaagtctttgacgtcctgaacaaggcaggtatgaaa
ctgaaccatgaaaagtgtaccttaagagtaaaggatggaaagtttctagggtcgtttcct
atcatgctcggccagaagatgtctcatgttcttcaaacctttaaaaggcaaaggtatgtt
cctaggaaggcaatgaaagctcaggtactagccgattttattgcgaaaatgactccacca
ttagaacctttagagtcccctgagtcaaccatagaagagcggaagaaggtcctccataca
gccatggctgcaatatgttacagaagaggaaggttaggaaatcctaaaggatattcacga
agaaaagttccaagtagaactaataacaacccagctcttggggtgcagctacaagtaact
gataagcaagtggtggttgacaatggaattgtccaagtcactttctctaatccaggaggt
gatgttattggaattaaatacaaaacaatcgataatgtacttgaaatcaagaacaaagaa
gataatcgaggatactgggacgtggtatggaaccgacctggagagtctaacatctttgac
aagctgcaagctaccaagtttagtattatagtgcaaaataatgaccgagtagagatttca
ttctctaagatttggagcccttcaatggataaaaccatagtccctttgaaggtagacaaa
aggtacatagttcagcgtggaagctcaggactttatttgtatgccataatggaacgcttg
aaagggtggcctgacgttgatatggatcaaattagggtggttttcaagcttcagagtaaa
aagtttcactacatggcaatatccgatgataggcaaagagaaatgccaatgcctcaagat
cgtgtcactggccagcctctagcctttcctgaagctgttcgtttaaccaatccagtcaac
cctaaacaaaaaggggaggtggatgacaaataccaatactcttgtgagaataaagataac
aaggtacatggatggatatcaaatgatccaccagtcggattttggatgatcacacccagt
aatgaatttcgcgatgctggacctgtcaagcaagacctgacctctcatgtggggcctatt
gttctcaatatgtttggtagtgttcattatgctggaaaggacttaaatgcagcatatcga
aatggagagccatggaaaaaagtttttggccctgttttcgtctatcttaattctgttcct
tctgtaaatcccaaagctctctgggaagatgctaaaagacaaatgtcaactgaagttaaa
agctggccatataattttcctcgatctcaagatttcccttcttctggtcaacggggaaat
gttgtaggtcgattagtagttcgtgagcagtacattaataaaagatcgatggatgcaagt
tttgcttatgtgggattggcagcgccaggtgttgcgggctcatggcaaacagaagcaaag
ggttaccaattttggactcaagctgataagaaaggaagtttctcaattaaaaacatcaga
gctgggaaatatagtttatatgcatttgttcctggttttattggagattacaagtataat
gttgatatcattattcaaccgggatctaatatcaaattgggtgtccttacatatgatcct
ccaagaaatggtccaactctttgggaaataggcattcctgatcgtaccgctgctgaattc
tatataccagacccaaacccaacactcatcaacaaattgtatattaatagcccagcaaat
aaatttagacaatatggattgtgggacagatataccgatctatatcctaagaatgatctc
atatatacagttggtgttagtaattatgctaaagattggttctatgcccatgttaataga
agggtaggaaatatggcatatgaggcaactacatggcagatcatatttgaacttaaaagt
gcaaagctaagtggaagttacactctacaaatagccttggcatcagctactaattctgaa
cttcaggtgcggttcaacaatgccaaagctaaacgacctcttttcacaacaaggctaata
ggcagggataatgctattgcaagaatgggaattcatggcttatattggttgtatagcatt
caagtaccaagtactcaacttctccaaggaaagaatataatttatcttactcagtctaga
aagggaagccctttcactggcattatgtatgattatattcgtttagaagcaccaataaaa
gcttaa
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