Manihot esculenta (cassava): 122723336
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Entry
122723336 CDS
T05761
Name
(RefSeq) DNA topoisomerase 1 alpha-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesc03032
]
122723336
Enzymes [BR:
mesc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
122723336
DNA replication proteins [BR:
mesc03032
]
Eukaryotic type
DNA Topoisomerases
122723336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Fn3_PTPRU
Trimer_CC
Motif
Other DBs
NCBI-GeneID:
122723336
NCBI-ProteinID:
XP_043811237
LinkDB
All DBs
Position
3:complement(26257692..26264398)
Genome browser
AA seq
910 aa
AA seq
DB search
MGSKLIALILAPIFDDPVIGYLIHANTELDWMIMAAPAYVKQGTYDFNDDDDDDGPLVFK
RGSNSTSKQNQLNLETRKPLLSSQNSNGQSSNVQKGKNAVPSSKASPVKSPIGSPKASTS
SVMASSVKSLVPNSKASSSLDEHMKQASKHNTSNVVKEDINSVKRESNDAEDDSEDDLPL
SSRIKGTNRSAPNVVKDEDSDDDNTPLSKKYIMKSSTGTLDSKPNNSSLKKPLASKILEN
GSIMRDKQQKTSQLPTKRPIDKPNSSDQSSSKKPKLSDVSTTTKIKQVTVKPEQKADDDA
CDNVVLSQRKKMGSSDNKLPSSKQNATKVASSSVQKKNIKNKKQIKNAKYSKSTKMQPSS
TDGQKKWTTLVHNGVIFPPPYQPHSIKILYKGQPVNLTPEQEEVATMFAVMKDTDYMQKP
KFLENFWTDWRKLLGKNHVIQKLEDCDFTPIYEWHQQEKEKKKQMSTEEKKALKEEKLKQ
EEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPD
CPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKD
YIWNIRAAYQKDFKSKDLTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVANVE
CIPGSSNLKFDFLGKDSIRYENTVEVKHEVYEAIGTFQKGKKQTDDLFDKLDTTKLNAHL
KELMPGLTAKVFRTYNASITLDEKLYEETEDGDVAEKVVIYQRANKEVAIICNHQRTISK
SHGAQMSRLTEKIEELKATLKELKIDLDRAKKGKPPLKDSAGKRKRNLSPEAIEKKIAST
NQRIEKMELAMKTKEDLKTVALGTSKVNYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAW
AMDVDPQFRF
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgggctcaaaattgatagccctaattctggcacctatatttgatgatccagtaatcgga
tatttgatacatgccaacacagagctcgattggatgataatggctgctcctgcatatgtg
aaacaaggcacctatgacttcaatgatgatgatgatgatgatgggcccctagtttttaaa
aggggtagcaactcaacttctaagcaaaatcagttaaacctcgaaacaaggaagcctcta
ttgtcatctcagaactctaatggtcaaagctcaaatgtccaaaagggtaaaaacgctgtt
ccatcttccaaggcatcaccagtgaaatctccaattggaagccctaaagcatcaacttca
tctgtgatggcatcttcagtgaagtcactggtgccaaattcaaaagcctcaagttcttta
gatgaacacatgaaacaggcatccaaacataatacatctaatgttgtcaaggaggatatc
aattctgttaaacgtgaatcaaatgatgctgaagatgattctgaggatgatctgccattg
agttctagaattaagggaaccaacagaagtgcacctaatgttgtcaaagatgaagattca
gatgatgataatacccctttatccaagaagtacataatgaagtcgagtacagggacattg
gatagtaagcccaacaactctagcttaaagaaacctttggcttcgaaaattctagagaat
ggttccattatgagggacaaacaacagaaaacatctcagctgccaactaagagacctata
gataagcctaattcatccgatcagtcttcttctaaaaagcctaagctttctgatgtatct
acaacaacaaaaattaagcaagtgacagtcaagccagaacagaaggcagatgatgatgcc
tgtgacaatgttgtgcttagtcagagaaagaagatgggctcttcggataataaattacca
tcttccaagcaaaatgcaacaaaagttgcttcttcttcagttcaaaagaagaatattaag
aacaagaaacaaattaaaaatgcaaaatattccaagtcaacaaaaatgcaacctagttcc
acagatgggcagaaaaagtggactaccttggttcacaatggtgtcatttttccacctcca
taccagcctcacagcattaagattctctacaaggggcagccagttaatttgactcctgaa
caagaggaggttgcaacaatgtttgcagttatgaaagatacagattacatgcaaaaacca
aaatttcttgagaacttctggactgattggcgaaaattattggggaagaaccatgtgata
cagaagttggaagactgtgatttcaccccaatatatgaatggcatcagcaggagaaggag
aagaaaaaacaaatgagtacagaagagaagaaggccttgaaagaagagaagttgaagcaa
gaggagaagtacatgtgggctattgttgatggtgtcaaagagaaggtaggaaatttcaga
gttgaaccacctgggctgttccgaggccggggagagcatccaaagatgggaaagctgaaa
aagcgcatccgtccaagtgatattaccataaatattggaaaggatgccccaattcctgac
tgccctattcctggtgaaagttggaaagaagtgaagcatgataatactgttacatggttg
gctttctggaatgatccaatcaatccaaaagaattcaaatatgtctttttggcagccagc
agttccttgaaggggcaaagtgacaaggagaaatatgagaaggcaagaaagttgaaggac
tacatatggaacatcagagcagcctaccaaaaggattttaagagtaaagatcttacaaag
aagcaaatagcagttgctacatatcttattgataagctagctcttagggcgggtaatgag
aaggatgatgatgaagccgatactgttggttgttgtacattaaaagtagcaaatgtagag
tgtattcctggaagttctaatttgaagtttgacttccttggaaaagattccattcgatac
gaaaacacagttgaggttaagcatgaggtgtatgaagctattggaactttccagaagggg
aaaaagcaaacggatgatctttttgacaagctggatacaactaaactgaatgctcacctg
aaggaacttatgcctggccttacagcaaaagtttttcgtacatacaatgcatcaatcaca
ttggatgaaaagttgtatgaggaaactgaagatggggatgtcgcagaaaaagttgtcatt
tatcaacgagcaaacaaagaggttgcgatcatttgtaatcaccagcgtactatctcaaaa
tctcatggtgcacaaatgtcaaggttgactgagaaaattgaggaactcaaggccaccctt
aaagagctgaaaattgatttggacagggcaaagaaggggaaacccccattaaaggattct
gctggaaagcgaaagaggaacctgagtccggaagccatagagaaaaagatagcatctacc
aatcagaggattgagaaaatggaattggctatgaagaccaaagaggatctgaaaactgtg
gctttagggacgtccaaagtcaattaccttgatcctaggatcactgtggcatggtgcaaa
cgacatgaagttccaattgaaaagatattcaacaaatctcttctggcaaagtttgcctgg
gcaatggatgtggatccccaattcagattctga
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