Manihot esculenta (cassava): 122723376
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Entry
122723376 CDS
T05761
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
122723376
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
122723376
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarbopepD_reg_2
CarboxypepD_reg
Y_Y_Y
EMC7_beta-sandw
Peptidase_C97
Motif
Other DBs
NCBI-GeneID:
122723376
NCBI-ProteinID:
XP_043811434
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Position
3:complement(8519808..8523648)
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AA seq
624 aa
AA seq
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MCLNKVVIDNGIVQVNFSSPGGDVIGIKYKEMDNVLETKNYENNRGYWDVVWSRPRDSNI
FDKVQATKFSIIVQNEDQVEISFSKIWSPSMDKTTVPLKVDKRYIVRRGSSGLYLYAVME
RLKGWPDVDMDQIRVVFKLQSEKFHYMAISDDRQRVMPMPQDRTTGQPLAYPEAVLLTNP
VNPQQKGEVDDKYQYSCENKDNKVHGWISNDPPVGFWMITPSNEFRDAGPVKQDLTSHVG
PIVLNMFGSVHYAGKDLNTEYRNGEPWKKVFGPVYVYLNSIPPSENPKALWEDAKRQMST
EVKSWPYNFPRSEDFPSSDQRGNVVGQLVVRDPYINEKLIDASLAYVGLAAPGAVGSWQT
EVKGYQFWTQADKKGSFSIKNIRAGKYSLYAFVPGFLGDYKYNVDVIIQPGSEIKLGVLT
YDPPRNGTTLWEIGIPDRTASEFYVPDANPTLVNKLYIDSPANKFRQYGLWERYTDLYPK
NDLIYTVGVSNYAKDWFFAHVNRKVGNTAYKPTTWQIIFELKSVMQSGSYTLQIALASAT
NSELQVRFNNANVKRPLFTTRLIGKDNAIARYGIHGLYWLYSIQVPASQLLQGKNTIYLT
QTRNGSPFSGIMYDYIRLEAPTKA
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttaaataaggtggtgattgataatggaattgtccaagtcaatttctctagtcca
ggcggtgatgttatcggaattaaatataaagaaatggataacgtacttgaaaccaagaat
tatgaaaataatcgaggatactgggatgtggtatggagccgacctagagattctaacatc
tttgacaaggtacaagctacaaagtttagtattatagtgcaaaatgaagaccaagtagag
atttcgttctctaagatatggagcccttcaatggataaaaccacagttcccttgaaggta
gacaaaaggtacatagttcgacgtggaagctcagggctttatctgtatgctgtaatggaa
cgcttaaaagggtggcctgacgttgatatggatcaaattagagtggttttcaaacttcaa
agtgaaaagtttcactacatggcaatatccgatgataggcagagagtaatgccaatgcct
caagatcgcaccactggccaacctctagcctatcctgaagctgttcttttaacaaatcca
gtcaaccctcaacaaaaaggagaggtggatgataaataccagtactcttgtgagaacaaa
gacaacaaggtgcatgggtggatatcaaatgacccaccggttggattttggatgatcaca
cccagtaatgaatttcgcgatgctggccccgtcaagcaagacctaacctctcatgtgggg
cctattgttctcaatatgtttggtagtgttcattatgctgggaaggacttaaatacagag
tatcgaaatggagagccatggaagaaagtttttggccctgtttacgtctatcttaattct
attccgccttctgaaaatcccaaagccctttgggaagatgctaaaagacaaatgtcaact
gaagttaaaagctggccatataattttcctcgatctgaagatttcccttcttctgatcaa
cggggaaatgtcgtaggtcaattagtagttcgtgacccatacatcaatgaaaaattgatt
gatgcaagtttagcttatgtgggattggcagcaccaggtgctgtgggctcatggcaaaca
gaagtaaagggttaccaattttggactcaagctgacaagaaaggaagtttctcaattaaa
aatatcagagctgggaaatatagtttatatgcatttgttcctggttttcttggagattac
aagtataatgttgatgtcattattcaaccaggatctgagatcaaattgggtgtacttaca
tatgatcctccaagaaatggtacaactctttgggaaattggcattcctgatcgtactgct
tctgaattctatgtaccagacgcaaacccaacactcgtcaacaaattgtatattgatagc
ccagcaaacaaatttagacaatatggattgtgggaaagatatactgatctataccctaag
aatgatctcatatataccgttggtgttagtaattatgctaaagattggttcttcgcccat
gttaacagaaaggttggtaatacggcatataagccaactacatggcagatcatatttgaa
cttaaaagtgtaatgcaaagtggaagttacactttgcaaatagccttggcatcagctact
aattctgaacttcaggtgaggttcaacaatgccaatgtcaaacgacctcttttcacaaca
aggctaataggcaaggataatgctattgcaagatacggaattcatggtttatattggctc
tatagcattcaagtaccagcttctcaacttctccaaggaaagaatacaatttatcttact
cagactagaaatggaagcccttttagtggtattatgtatgattatattcgtttagaagca
ccgacaaaagcttaa
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