Manihot esculenta (cassava): 122723677
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Entry
122723677 CDS
T05761
Name
(RefSeq) protein ELC-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03250
Viral life cycle - HIV-1
mesc03272
Virion - Hepatitis viruses
mesc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122723677
03272 Virion - Hepatitis viruses
122723677
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122723677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
122723677
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mesc04147
]
122723677
Membrane trafficking [BR:
mesc04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
122723677
Exosome [BR:
mesc04147
]
Exosomal proteins
Proteins found in most exosomes
122723677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
RWD
DUF4806
Motif
Other DBs
NCBI-GeneID:
122723677
NCBI-ProteinID:
XP_043812708
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All DBs
Position
5:6875052..6876081
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AA seq
342 aa
AA seq
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MAPPASSIQFIDTALSCTSPHALSYPDPKQKWLIRKHLLSLIQDYPSFTPSTDTFTHNNG
TAVNLLNVTGELRVSRYTPHVPLTIWLHEKYPYMPPLVFVLANSMTPIHRDHPFVDLSGS
TSSPYLQTWIFPRCNLIDLVRNLVRIFSRDHPFIYGSAVASFTHPSLVSKMEALDRLSGM
LHYDMTAFLVKNEEELEDLSKLQEELIKRETITRNMISSLEQEKSSLKDKVTRLVDEADV
VMNWLRVNGANSAAVGEDEAEAFEAADEESKLKIECFSADWAIEDLIYALDKAVEEGAVP
FDAYIKQVRVLAREQFSYRAMLLTRSIQNDCSSMVAIGQYNT
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggctccaccagcatcttcaatccaattcattgatactgcgctttcttgtaccagtcct
catgcattatcctacccagaccctaaacaaaaatggctcatcagaaaacaccttctttca
ctaatccaggactatccaagtttcaccccttccaccgatacattcacccacaacaacggc
accgccgtcaaccttctaaacgtcaccggagaactccgcgtctccaggtatacccctcat
gtacctctcaccatttggctccatgaaaaatacccttacatgcctcctttagtctttgtt
ttggcaaattcgatgaccccaattcatcgagaccacccttttgttgacctatctggttcc
acctcttctccttatctccaaacttggatattccctcgatgcaacctcatcgaccttgtt
cgtaaccttgtcaggattttcagtcgcgaccatcctttcatttatggctctgctgtcgca
agcttcactcacccttcccttgtctcaaagatggaggctcttgaccgtctttcgggtatg
cttcactatgatatgacggcctttctggtaaaaaatgaagaagaattggaggacttgtct
aagttgcaggaggaactgatcaagagagagactataactagaaacatgatcagtagtctt
gagcaggagaagtccagccttaaggacaaagtgacgaggctggtggatgaagcagatgtg
gtaatgaactggttgagagttaatggtgcgaactcggctgctgttggagaagatgaagcg
gaggcgtttgaagctgcagatgaagaatcaaaactgaagattgaatgctttagcgcagat
tgggccatagaggatttgatatatgcattggacaaggcagttgaggaaggagcagtgcct
tttgatgcatatattaagcaagtgagagtgctggcgagagagcagttctcatatagagct
atgctcctgacacgttcaatccaaaacgactgctcatcaatggtggctattggccaatac
aacacttga
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