Manihot esculenta (cassava): 122724622
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Entry
122724622 CDS
T05761
Name
(RefSeq) syntaxin-52-like
KO
K08503
syntaxin of plants SYP5
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122724622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
122724622
Membrane trafficking [BR:
mesc04131
]
SNARE
SNAP-25[C] (Qc)
STX8
122724622
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
122724622
NCBI-ProteinID:
XP_043816087
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All DBs
Position
9:20256109..20274027
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AA seq
283 aa
AA seq
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MARVICDHICDEIATTVWAGIFSLSSTTSSGSTVHCPPSNQPPLSSRHRPINHRGLHTIV
GVGRRSPRNRPYSLQSLLTKLPGKQKISEKEMNRHRDMVANLRTKVNQMASTLNMSNFAN
RDSLLGPEIKPADAMRRTEGLDNHGIVGLQWQIMKEQDEGLEKLEETVTSTKHIALAVNE
ELDLHIRLIDDLDQHVDVIDSRLRANSHYFAIIEQIAEGNMWLNDNIGVVPKNSWAIDPF
GYSATMAYLSAVWVSRTCLFRGLIMRFGPEEPRTSAVSSAASE
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagttatttgcgaccatatttgcgacgaaattgcgacaactgtttgggcgggg
atattttcactgagctccaccacttccagcgggtccactgtccattgtccaccgtccaac
caacctccactctcctcccgacatcgaccgattaaccatcgcggcctccacacaatcgtc
ggcgtcggtcgtcgctctccacgcaatcgtccctatagcttacagtcccttttgacaaag
cttcctgggaagcagaaaatatcagagaaagagatgaatcgtcacagggacatggttgca
aatttgagaacaaaagtaaaccaaatggcttccacattgaatatgtcaaactttgccaac
agggatagcttgttgggtccagaaataaagccagctgatgccatgcgtagaactgaaggt
ctggacaaccacggcattgtcggtcttcagtggcaaattatgaaagagcaagatgagggc
cttgaaaagttggaggagacagtaacaagtacaaaacatattgcactggcagtcaatgaa
gaacttgatcttcacattagacttattgatgacttggatcaacatgtggatgttattgat
tcccgcttacgggccaattcacattactttgccataattgaacagattgcagaggggaat
atgtggttgaacgacaacattggtgttgttcctaaaaattcttgggcaatagatccattt
ggctactcagctaccatggcatatctctccgccgtatgggtttcgagaacatgcttattc
agaggactcattatgaggttcggacccgaggaaccgagaacctcagcagtgagttcagct
gcttctgag
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