Methanocaldococcus lauensis SG7: MLAUSG7_0443
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Entry
MLAUSG7_0443 CDS
T07631
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mesg
Methanocaldococcus lauensis SG7
Pathway
mesg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mesg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MLAUSG7_0443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesg03019
]
MLAUSG7_0443
03009 Ribosome biogenesis [BR:
mesg03009
]
MLAUSG7_0443
Enzymes [BR:
mesg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MLAUSG7_0443
Messenger RNA biogenesis [BR:
mesg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MLAUSG7_0443
Ribosome biogenesis [BR:
mesg03009
]
Prokaryotic type
rRNA helicases
MLAUSG7_0443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Flavi_DEAD
AAA_22
RecX_HTH1
NEMP
Motif
Other DBs
NCBI-ProteinID:
CAB3287891
UniProt:
A0A8D6SV05
LinkDB
All DBs
Position
I:complement(384515..385654)
Genome browser
AA seq
379 aa
AA seq
DB search
MNFNDLNLSENTLNAIKNKGFEKPTDIQTKVIPLFLNENCNIVAQARTGSGKTASFGIPL
IDLIDENSKLSAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKPIYPQIKDLKNAN
IVVGTPGRILDHINRGTINLKNVKYFILDEADEMLDMGFIEDVEKILNSCNNKNKRILLF
SATMPEKILNLCKKYMKNYEFVKVKTTANIDQSFIETKENERFKTLCKLLKNNEFYGLVF
CNTKKDTKELRDKLRDIGFKAEAIHGDLKQPRREKIIRLFKQKRIKILIATDVMCRGIDV
NDLKCVINYHLPQNPRAYMHRIGRTGRFDKKGRSITIITKREYRKLKYIEKTYKIKIKRH
KLNYSKQIKKVDNKNNLHK
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaatgacttaaacttatcagaaaatacattaaatgctattaaaaataaaggt
tttgaaaagccaactgatattcagacaaaagttattcctttatttttaaatgaaaattgt
aatattgtggcacaagcaagaactggtagtgggaaaaccgcttcatttggaataccatta
attgatcttatagacgaaaactctaaattatctgcaattattttaacacctacaagggaa
ttagcaattcaagttgcagatgaaatagaatcactaaaaggaaacaaaaatttaaaaatt
gctaaaatttatggtggaaagccaatatatccacaaattaaagatttaaaaaacgctaac
atagttgtaggaacaccggggagaattttagaccacataaatagaggcaccataaatttg
aagaatgttaaatacttcatattagatgaagctgacgaaatgctggatatgggatttatt
gaagatgttgaaaaaattttaaattcatgcaataataaaaataaaagaatccttttgttt
tcagcaacgatgccagaaaagatattaaatctctgtaaaaaatatatgaaaaactatgaa
tttgtaaaggttaaaactactgcaaatattgatcagagttttattgaaactaaggaaaat
gaaagatttaaaacattatgtaaattattaaaaaataatgaattttatgggttagttttt
tgcaatactaaaaaagatactaaagagttaagggataaattgagagatattgggtttaaa
gcagaagcaatacatggagatttaaaacaaccaagaagagaaaagataataagattgttt
aaacaaaaaagaattaaaattttaatagctacagatgtaatgtgcagaggtattgatgtt
aatgatttaaaatgtgtaattaactatcatctacctcaaaacccaagagcatatatgcat
agaattggaagaactggaagatttgataaaaagggaagatcaataactattattactaaa
agggagtataggaagttaaaatatattgaaaaaacatataaaataaagattaaaagacat
aaactaaactattctaaacaaataaaaaaagtagataataaaaacaacctacataaataa
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