Mesorhizobium sp. PAMC28654: LGH82_01555
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Entry
LGH82_01555 CDS
T10450
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mesi Mesorhizobium sp. PAMC28654
Pathway
mesi03410
Base excision repair
mesi03430
Mismatch repair
mesi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mesi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LGH82_01555 (recJ)
03430 Mismatch repair
LGH82_01555 (recJ)
03440 Homologous recombination
LGH82_01555 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesi03400
]
LGH82_01555 (recJ)
DNA repair and recombination proteins [BR:
mesi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LGH82_01555 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LGH82_01555 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LGH82_01555 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
QRPTase_C
Motif
Other DBs
NCBI-ProteinID:
UDL90115
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Position
319366..321150
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AA seq
594 aa
AA seq
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MTGERRLFLDVRQSATGVSWEHRLTARQDMTALAIAQGHGVPDIVARVLAGRGVTAEQTE
RFLDPTIRDLLPDPASLTDMERAAARIAAAVVTKEKVAIFGDYDVDGAASSALLKRFLAH
FSVPSEIYIPDRIFEGYGPNPDAMRELVSRGATLIVTVDCGTNSAASVDAAMQAGADVVV
LDHHQVGGPLPEAIAVVNPNREDDLSGQGHLCAAGVVFLTLVQTAKILRGRLTDAPPPDL
LSMLDLVALATVCDVVPLIGVNRAFVVKGLQVARQQKNEGLAALARVSRIGEPVSTFHLA
YLIGPRINAGGRIGDAALGSRLLATDDPVEARTISETLDRLNQERQLMEQEMLAAARAEA
DAELAGGNGPAIVVTASNNWHPGIVGLLASRLKDHARRPAFAIAFNANGVGTGSGRSVSG
FDLGRLVREAADAGLIVKGGGHAMAAGITVERAKLGELRAFFEERAAGDVFRLQDEERLA
IDGALAAEGATLGLLDALEKAGPFGAGHVAPVFALPRHRLADARPVGTNHIRAELQSESG
GRIQAIAFRAVDTTLGEFLFKNRGKTVHVAGSLSGNYWNGNRTVQFRITDAALA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcgaaagacgacttttccttgatgtcaggcagtcggcgaccggtgtttcctgg
gaacaccggctgacggcgcggcaggacatgacggcgctcgccatagcgcaaggccatggc
gtgcccgacatcgtcgcccgcgtgcttgccgggcgtggcgtgaccgcggaacagaccgag
cgctttctcgatccgaccatccgtgacctcctgcctgatccggcgtcgctgaccgacatg
gaaagggctgccgcacgcatcgccgcagctgtggtgaccaaggagaaggtggcgatcttc
ggcgactatgatgtcgacggcgccgcctcgtcggcgctgctgaagcggtttctcgcgcat
ttttctgtgccgtcggagatctatatcccagaccggattttcgagggatatggccccaat
cccgatgcgatgcgtgaactggtttcgcgcggcgcgacactgatcgtcaccgtcgactgc
ggtaccaacagcgcggcttccgtcgatgcggcgatgcaggccggcgccgatgtcgtggtg
ctcgaccatcaccaagttggcggcccgttgccggaggccattgccgtggttaatcccaac
cgcgaggacgacctttccggacaaggccacctttgcgcggcgggtgtcgtctttctcaca
ctggtccagacggcaaaaatactgcgcgggcgcctgaccgacgcgccgccgcctgacctg
ctttccatgctggatctggttgccctggcgaccgtctgtgacgtggtgccgcttatcggc
gtcaaccgcgcctttgtcgtcaagggactgcaggtggcgcgacagcagaagaatgagggc
ctggcggcactggcgcgtgtctcgcgcatcggcgagccggtcagcacgttccatctggcc
tatctgatcgggccgcgcatcaacgccggcgggcgcatcggcgacgctgcacttggcagc
cggctgctcgccaccgacgatccggtcgaggcccgtaccatttccgaaacgctggaccga
ctcaaccaggagcggcagctgatggagcaggagatgctggcggcggcgcgcgccgaggct
gacgccgagcttgccggcggcaatggtccggcaatcgttgtcaccgccagcaacaactgg
caccccggcatcgtcggcctgcttgcctcgcggctgaaggatcatgcgcgccgcccggcc
ttcgccatagccttcaacgccaatggtgtaggcacgggttcaggccgctcggtgtcgggc
ttcgacctcggccgcctggtgcgcgaggcggcggatgccgggctgatcgtcaagggcggt
ggccatgccatggcggcgggcatcacggtagagcgcgcgaaactcggcgagctcagggcc
ttcttcgaggagcgtgcggctggcgatgtgttccggttgcaggacgaggaacgcctggcg
atcgatggcgcgctcgcggccgagggcgcgacgcttggcctgctcgacgcgctggaaaag
gcaggtccgttcggtgccgggcatgtggcgccggtcttcgcgctgccgcgccatcgtctt
gccgacgcgcgtccggttggcaccaatcacatccgtgccgaactgcagtcggagagcggt
ggccgcatccaggcgatcgccttccgtgccgttgataccacgcttggcgagttcctgttc
aagaaccggggcaagaccgtacacgtcgccggctcgctgtcaggcaattactggaacggc
aaccgaacggtgcaatttcgcatcaccgatgccgcgcttgcctga
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