Mesorhizobium sp. PAMC28654: LGH82_01880
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Entry
LGH82_01880 CDS
T10450
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mesi Mesorhizobium sp. PAMC28654
Brite
KEGG Orthology (KO) [BR:
mesi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesi03032
]
LGH82_01880 (topA)
03400 DNA repair and recombination proteins [BR:
mesi03400
]
LGH82_01880 (topA)
Enzymes [BR:
mesi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LGH82_01880 (topA)
DNA replication proteins [BR:
mesi03032
]
Prokaryotic type
DNA Topoisomerases
LGH82_01880 (topA)
DNA repair and recombination proteins [BR:
mesi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LGH82_01880 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UDL90173
LinkDB
All DBs
Position
complement(390234..392855)
Genome browser
AA seq
873 aa
AA seq
DB search
MDVVVVESPAKAKTINKYLGKNYKVLASFGHVRDLPAKDGSVRPDEDFAMSWAVDTASGK
RLAEIAQAVKDADGLILATDPDREGEAISWHVLEVLKQKRALKDKTVSRVVFNAITKSSV
LEAMANPRQIDVPLVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ESEIERFIREEYWQIAALLGTPRNETFEARLTAFESKKLQKLDIANKTQADDIKSMLEGA
TFKVASVEAKPTKRNPGPPFTTSTLQQAASSGLGFSASRTMQVAQRLYEGMEIGGETTGL
ITYMRTDGVQMAPEAISAARDAIAKEFGPKYLPEKPRQYTAKAKNAQEAHEAIRPTDFMR
TPASVRQYLDSDQMRLYELIWKRAIASQMQPAEIERTTVEIEAVNGARSAELRAIGSVVR
FDGFIAAYTDQKDDDAEDEESRRLPEIRPGEQLARQAINATQHTTEPPPRYSEASLIKKL
EELGIGRPSTYTAILKTLEDRDYVTIDKRRLVPQAKGRLLSAFLESFFERYVEYDFTASL
EEKLDEISDGKLAWKDVLRDFWKDFSGAVADIKELRVTDVLDALNEELAPLVFPAREDGS
NPRICPKCGSGNLSLKLGKFGAFVGCSNYPECCFTRQLGDAANPNGDNGGGDDGTKVLGK
DPYTAEEITLRSGRFGPYIQRGDGKEAKRSSLPKGWTPESIDHEKALALLALPRDVGQHP
ESGKMISAGLGRYGPFVLHDGTYANLESIEDVFSIGLNRAVSVIAEKQLKGKGGRNGGTA
AALKELGEHPDGGGKIVVRDGKYGPYVNFGKVNATLPKGKDPQSVTIEDALALIAEKEAK
GGGGKKPVRKAAAAKAPATKKTAAKKPAAKKKG
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggacgtagtcgtcgtcgaatcgccggccaaggcgaagacaatcaacaagtacctggga
aagaactacaaggttctggcctcgtttggtcacgtccgtgatttgccggccaaggacggc
tcggtgcgcccggacgaggattttgccatgtcctgggctgtcgacacggcctcgggcaaa
cgcctcgccgaaatcgcccaggcggtgaaggatgccgatggcctgatcctcgcaaccgat
ccggatcgtgagggcgaagcaatctcctggcacgttctggaagtgctcaagcagaagcgc
gcgttgaaggacaagacggtcagccgtgtcgtcttcaacgccatcaccaagtcgtcggtg
ctggaagcgatggccaatccgcgccagatcgatgtgccgctggtcgatgcctatctcgcc
cgccgcgcgctcgactatcttgtcggtttcacactctcacccgttctgtggcgcaaattg
ccgggcgcccgctccgccggccgcgtccagtccgtggccttgcgcttggtctgcgaccgc
gaatccgagatcgagcggttcatccgcgaggaatactggcagatcgccgcactgctcggc
actccgcgcaacgagactttcgaggctcggctgaccgcgttcgagagcaagaagctgcaa
aagctcgatatagccaacaagacgcaggccgacgacatcaagtcgatgctcgaaggcgcg
accttcaaggtcgcctcggtcgaagccaagccgacaaagcgcaatcccggcccgcccttc
accacctcgacgctgcagcaggccgcctcatcggggctcggcttttcggccagccgcacc
atgcaggtggcgcagcggctgtatgaaggcatggaaatcggcggggagaccaccggcctg
atcacctacatgcgaaccgatggcgttcagatggcaccggaggcgatctctgctgctcgt
gacgccattgccaaggagttcggaccaaaatatctgcccgaaaagccgcgccaatacacc
gccaaggccaagaatgcccaggaagcgcacgaagcgatccgcccgacggatttcatgcgc
actccggcatcggtcaggcagtatctcgattccgatcagatgcggctctatgagttgatc
tggaagcgcgccatcgccagccagatgcagccggccgagatcgagcgtaccaccgtcgag
atcgaagccgtcaacggcgcccgcagcgccgagctgcgcgctatcggctcggtcgttcgc
ttcgatggcttcatcgccgcctacaccgaccagaaggacgatgacgcggaagacgaggaa
agccgccgcctgcccgagatccgccccggcgaacagttggcacgccaggccatcaacgcc
acccagcacacgacagagccgccgccgcgttattcggaagcctcgctgatcaagaagctg
gaagagctcggcattggccgcccgtcgacctatacggcgatcctgaagacgcttgaggat
cgtgactatgtcaccatcgacaagcgccggctggtgccgcaggccaagggccgcctgctg
tcggctttcctggaaagcttcttcgagcgctatgtcgagtacgacttcacggcatcgctt
gaggaaaagctcgacgagatttcggacggcaagctcgcctggaaggatgtgctgcgcgac
ttctggaaggatttttcgggcgccgtcgccgacatcaaggaattgcgcgtcaccgacgtt
ctcgatgctctcaacgaagagctggcgccgctggttttccccgcccgcgaggacggttcg
aacccccgcatctgtccaaaatgcggcagcggcaacctgtcgctgaagctcggcaagttc
ggcgccttcgttggctgttcaaactatcccgaatgctgcttcactcgccagctcggcgac
gccgccaacccgaatggcgacaacggcggcggcgatgacggtaccaaggtgctcggcaag
gatccgtacacggccgaggaaatcacgctgcgcagcggccgcttcggcccctacatccag
cgtggcgacggcaaggaagccaagcgttccagcctgcccaagggctggacgccggagtcc
atcgaccacgaaaaggcgctcgccttgctggcgctgccgcgcgatgtcggccagcatccg
gaatccggcaagatgatttccgccgggctcggccgctacggcccgttcgtcctgcatgac
ggaacctacgccaaccttgagagcatcgaggatgtgttctcgatcggattgaaccgcgcc
gtctcggtgattgccgagaagcagctgaagggcaagggcggccgcaatggcggcaccgcc
gcggccctgaaggagctcggcgagcatcccgatggtggcggcaagatcgtcgtgcgtgac
ggcaaatacgggccttacgtgaacttcggcaaggtcaacgccacgctgcccaagggcaag
gatccgcagtcggtgacgatcgaggatgccttggcgctgattgccgagaaggaagccaag
ggcggcggcggcaagaagccggtccgcaaggctgccgcggccaaggcaccggcaaccaag
aaaacggcggctaagaagccggcagcaaagaaaaaaggatag
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