Mesorhizobium sp. PAMC28654: LGH82_20130
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Entry
LGH82_20130 CDS
T10450
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
mesi Mesorhizobium sp. PAMC28654
Pathway
mesi02024
Quorum sensing
mesi03060
Protein export
mesi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
mesi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LGH82_20130 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LGH82_20130 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LGH82_20130 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
mesi02044
]
LGH82_20130 (ffh)
Enzymes [BR:
mesi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LGH82_20130 (ffh)
Secretion system [BR:
mesi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LGH82_20130 (ffh)
Eukaryotic Sec-SRP protein
LGH82_20130 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_33
Zeta_toxin
AAA_30
AAA_22
AAA_31
ArsA_ATPase
DnaB_C
ResIII
AAA_19
6PF2K
AAA_14
AAA_17
Thymidylate_kin
ATPase
APS_kinase
AAA_18
bPH_10
AAA_5
KTI12
NACHT
AAA_16
ABC_tran
AAA_7
AAA
AAA_28
NPHP3_N
NB-ARC
DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID:
UDL87492
LinkDB
All DBs
Position
complement(4115010..4116614)
Genome browser
AA seq
534 aa
AA seq
DB search
MFESLQERIGSILNGLTGRGALSEADVSAALREVRRALLEADVALEVVRSFTDKVREKAV
GAAVVKSIKPGQMVVKIVHDELVEMLGAEGVAIDLNAPAPVVIMMVGLQGSGKTTTSAKI
AKRLSERQNKKVLMASLDTRRPAAQEQLRQLGEQVKVATLPIIEGQTPVDIARRAVQAAK
LGGHDVVILDTAGRTHIDEPLMVEMADIKKVSSPHEILLVADSLTGQDAVNLAKSFDERV
GITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGTGEKMDGLEEFHPKRIADRILGMGDI
VSLVEKAAENIDAEQAAAMAKKMQSGKFDLNDLAGQLQQMSKMGGMGGIMGMMPGMGKMK
DQMAAAGLDDKMFGRQLAIISSMTKAERANPDVLKHSRKKRIAAGSGTDAAEINKLLKMH
RGMADMMKAMGGKGKGGGLMRGMMGGLASKMGLGGMMPGGMGGMMGGGMPDLSKMDPKQL
EALQKQAQAAGIGGMKGLPSGLPGGGGLPGLPGGMKLPGLPGMGGGLPGLGKKK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaatcactacaggaacgtattggttcgatcctgaacggcctgaccggccgcggc
gccctgtcggaggctgatgtctcggcagcgctgcgcgaggtgcgccgtgcgctgctcgaa
gccgacgtcgcgctggaagttgtgcgttccttcaccgacaaggtgcgcgagaaggccgtc
ggcgccgccgtggtgaagtcgatcaagcccggtcagatggtcgtcaagatcgtccatgac
gaactggtcgagatgctgggcgccgagggcgtcgccatcgacctcaatgccccggctccc
gtcgtcatcatgatggtcggcctgcagggctccggcaagacgacgacttcggccaagatc
gccaaacgcctttccgagcgtcagaacaagaaggttctgatggcctcgctcgacacacgg
cgtcccgcggcgcaggagcagcttcgccagctcggcgagcaggtcaaggtcgccacgctg
cctatcatcgagggccagacgccggtcgacatcgcccgccgcgccgttcaggcggccaag
cttggcggccacgacgtcgtcatcctcgacaccgccggccgcacccatatcgacgagccg
ctgatggtcgagatggccgacatcaagaaggtgtcgagcccacacgaaatcctgctggtc
gccgattcgttgaccggccaggacgccgtcaatctggcgaagagcttcgacgagcgcgtc
ggcatcaccggcctggtgctgacccgcatggacggcgacggccgtggcggcgccgcattg
tccatgcgcgccgtcaccggcaagccgatcaagctgatcggtaccggcgagaagatggac
gggctggaagagttccatcccaagcgcatcgccgaccgcatcctcggcatgggcgacatc
gtcagcctcgtcgaaaaggctgccgaaaacatcgacgccgagcaggcggcggcgatggcc
aagaagatgcagtcgggcaagttcgacctgaacgacctcgccggccagcttcagcagatg
tcgaagatgggcggcatgggcggcatcatgggcatgatgccgggcatgggcaagatgaag
gaccagatggccgcggccggcctcgacgacaagatgttcggccgccagctcgccatcatc
tcgtcgatgaccaaggccgagcgcgccaacccggacgtactcaagcattcgcgcaagaag
cgcatcgccgctggctccggcaccgacgcggccgagatcaacaagctgctcaagatgcat
cgcggcatggccgacatgatgaaggcgatgggcggcaagggcaaaggcggcggcctcatg
cgtggcatgatgggcggcctcgcctccaagatgggcctcggcggcatgatgcccggcggc
atgggtggcatgatgggcggtggcatgcccgacctttcgaagatggacccgaaacagctc
gaagcgctgcagaagcaggcacaggcggccggcatcggcggcatgaagggcttgcccagt
ggtcttccaggaggcggtggcctgcccggattgcccggcggcatgaaactcccgggcctg
cccggcatgggcggcggtttgcccggtctcggcaagaagaagtga
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