Mesorhizobium sp. PAMC28654: LGH82_20325
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Entry
LGH82_20325 CDS
T10450
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mesi Mesorhizobium sp. PAMC28654
Pathway
mesi00300
Lysine biosynthesis
mesi00470
D-Amino acid metabolism
mesi01100
Metabolic pathways
mesi01110
Biosynthesis of secondary metabolites
mesi01120
Microbial metabolism in diverse environments
mesi01230
Biosynthesis of amino acids
Module
mesi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mesi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LGH82_20325 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LGH82_20325 (dapF)
Enzymes [BR:
mesi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LGH82_20325 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PmbA_TldD_2nd
Motif
Other DBs
NCBI-ProteinID:
UDL87529
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Position
complement(4153674..4154558)
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AA seq
294 aa
AA seq
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MASTAPFAKMNGIGNEIIVADMRGRADRVTPAAAIALNADAATKFDQIMAIHDARTDGTD
YFIHILNSDGSRAQACGNGTRCVVQALAADTGRKTFTFETVAGILNAREHADGLISVDMG
TPRFGWQDIPLAEEFRDTRMIELQIGPIDAPVLHSPSVVSMGNPHAIFWVDRDVWSYELD
RFGPLLENHPIFPERANITIAQVTSRETMVIRTWERGAGLTKACGSAACASVVAAARTRR
TGRSVNLMTPGGGSLHVEWRDDDHVILTGAAEWEFSGSFDPATGIWARDTESAA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcactgcccctttcgccaagatgaacggcatcggcaacgagatcatcgttgcc
gacatgcgtggccgtgccgatcgtgtaacgccggcggccgccattgcgctcaatgccgac
gccgccaccaagttcgaccagatcatggcgatccatgacgcaagaactgatggcaccgac
tacttcatccacatcctgaattccgacggttcgcgcgcccaggcctgcggcaacggaacg
cgttgcgtcgtccaggcgctcgccgccgacaccggccgcaagacattcaccttcgagacc
gtcgccggcatcctcaatgctcgggaacatgccgacggtctgatctcggtcgacatgggc
acgccgcgctttggctggcaggacattccgctggccgaggaatttcgcgacacccgcatg
atcgagctgcagatcgggccgatcgacgcgccggtactgcattcgccctcggtcgtctcg
atgggcaatccgcacgccatcttctgggtcgaccgcgatgtctggtcctacgaactcgac
cgcttcgggccgctgcttgagaaccatccgatcttccccgaacgggccaacatcaccatc
gcgcaggtcacctcacgggaaaccatggtcatccgcacctgggaacgcggcgccggcctg
accaaggcctgcggctccgccgcgtgcgcatccgtggtcgccgccgcccgcaccaggcgc
accggccgcagcgtcaacctgatgacgcccggcggcgggtcgctgcatgtcgaatggcgg
gacgacgaccacgtcatcctgacgggtgcggccgaatgggaattttcgggcagcttcgat
cccgcgaccggaatctgggcccgcgacaccgaaagcgcggcctga
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