Mesorhizobium sp. PAMC28654: LGH82_21120
Help
Entry
LGH82_21120 CDS
T10450
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mesi Mesorhizobium sp. PAMC28654
Pathway
mesi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mesi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LGH82_21120 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesi03019
]
LGH82_21120 (recQ)
03400 DNA repair and recombination proteins [BR:
mesi03400
]
LGH82_21120 (recQ)
Enzymes [BR:
mesi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LGH82_21120 (recQ)
Messenger RNA biogenesis [BR:
mesi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LGH82_21120 (recQ)
DNA repair and recombination proteins [BR:
mesi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LGH82_21120 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
DACNK
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UDL87666
LinkDB
All DBs
Position
complement(4310767..4312605)
Genome browser
AA seq
612 aa
AA seq
DB search
MLGSRQSSPVEDPKRRVLKDVFGFDDFRPGQADVMEALLAGRHVLAVMPTGAGKSLCYQV
PALVLGGLAIVVSPLVALMQDQVAALRLAGVAADTINSSIDREANVGAWRRVASGQTRLL
YLAPERLMTKRMLDALARLDVRLIAIDEAHCISQWGPAFRPEYEDLSRLRGIFPNVPIIA
VTATADESTRNDIEARLFAERVETLVLGFDRPNIKLAIEAKQDSKRQLLRFIERHAGRSG
IIYCLSRKKTEEMAAFLEKNGVTALAYHAGMSKDAREANQNAFMTLSGVVMVATIAFGMG
IDKPDVAYVFHTDMPGSLEAYYQEIGRAGRDGREAEAHMLFGLGDIRMRRLFIDDENASE
EHKRRSHRRLDTLIGYCETAQCRRQVLLGYFGEEAPPCGNCDNCLDLAPRADGGAEARII
LAAMAETGERFGAGHVIDVLLGHETDKVQVRGHQGLASFGSGVEHKKDFWLSLIRQLVAN
GFLAPDPNGHGGLAIAEKGHALGRGEVPFHYRVEVRSRASRKLRDQAAAAGAEGLDASLL
ATLKTLRLRLAKERQVPAYVVFSDRTLIDMAERCPRDLDAFAEVNGVGATKLKEFGPIFL
DTIAAHLSDGLA
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgctgggatcgagacagagcagtccggtcgaggatccgaagcggcgggtcctcaaggat
gtgttcggcttcgacgattttcgcccaggccaggccgatgtcatggaagcgttgctggcc
gggcgccatgtgctggccgtcatgccgacgggtgcgggcaaatcgctttgctatcaggtt
ccggcgctggttctgggcgggctcgccatcgtcgtttcgccgctggtggcgctgatgcag
gaccaggtcgccgccttgcgccttgccggcgtggcggcggacacgatcaattcctcgatc
gaccgtgaggccaatgtaggtgcctggcgtcgcgtggcgtcgggccagacgcgcctgctc
tatctcgcgccggagcgactgatgaccaagcgcatgctcgacgcgctcgccaggctcgat
gtccgcctgatcgccatcgacgaggcgcattgcatctcgcaatggggtccggccttccgg
cccgaatacgaggatctgtcgcggctgcgcggcattttcccgaacgtgccgatcatcgcg
gtgacggcgacggcggacgagagcacacgcaacgacatcgaagcacggctgttcgccgag
cgcgtcgaaaccctggtgctgggtttcgacaggccgaacatcaagcttgccatcgaggcc
aagcaggacagcaagcggcagttgctgcgctttatcgagcgccatgccggtcgtagcggg
atcatctattgcctgtcgcgcaagaagacggaggagatggcggccttcctcgagaagaac
ggggtcaccgcgctcgcctatcatgccggcatgagcaaggacgcgcgtgaagcgaatcag
aacgctttcatgaccctgtccggcgtcgtcatggtggcgaccatcgccttcggcatgggc
atcgacaagcccgatgtcgcctatgtcttccacaccgatatgccgggcagcctggaagcc
tactaccaggaaatcggccgtgccggccgcgatggccgggaggccgaggcgcatatgctg
tttggccttggcgacatccgcatgcgccggcttttcatcgacgacgagaacgcgtcggaa
gagcacaagaggcgctcgcatcgccggcttgacacgctgatcggctattgcgagacggcg
cagtgccgccgccaggtgctgcttggctatttcggcgaggaagccccgccttgcggcaat
tgcgacaactgcctcgacctggcgccgcgcgcggatggcggggcggaggcgcggatcatc
ctggcggcaatggccgagaccggtgagcgttttggcgcgggccatgtcatcgacgtcctg
cttggccatgaaaccgacaaggtgcaggtccggggccaccaggggctcgccagcttcggc
agtggtgtcgagcacaagaaggatttctggctgtcgctgatccgtcagctcgtggcgaac
ggtttcctggcgccggatccgaacggccatggtggcctcgccatcgccgagaagggccat
gcgcttggccgtggcgaggtgccgttccactaccgtgtcgaagtgcgcagccgcgcctcg
cgcaagttacgcgatcaggcggccgccgccggcgctgaaggcctggatgcttcgctgctc
gccacgctcaagacattgcggctgcgtctggcgaaagagcgtcaggtgccggcctatgtg
gtgttctccgaccggacgctgatcgacatggccgaacgctgcccgcgcgacctcgacgcc
ttcgccgaagtgaatggcgtcggggcaacgaagctcaaggaattcggcccgatattcctc
gacacgatcgccgcgcacctgtcggacggtttggcatga
DBGET
integrated database retrieval system
