Mesorhizobium sp. J8: MJ8_29940
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Entry
MJ8_29940 CDS
T10402
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mesj Mesorhizobium sp. J8
Pathway
mesj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mesj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MJ8_29940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesj03400
]
MJ8_29940
Enzymes [BR:
mesj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
MJ8_29940
DNA repair and recombination proteins [BR:
mesj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MJ8_29940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BCM19221
LinkDB
All DBs
Position
complement(3179723..3180496)
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AA seq
257 aa
AA seq
DB search
MTRIATFNVNGVNGRLPVLLKWLNETDYDVVCLQELKTSDEKFPIEAIQDAGFGAIWHGQ
KSYNGVAILARGREPVERRRGLPGDPDDTHSRYLEAEIEGLVVGCIYLPNGNPAPGPKFD
YKLRWFERLTDYSKSLLGERAVLCGDYNVVPTEIDAVVPRRWLGDAVFFPESRNAYARML
SLGWVDAMRRIHPDKGIYTYWNFSYRGGYDRSSGLRMDHLLVSPSVAAGIRDAGVDVDTR
GWEKPSDHAPAWIEVGR
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtgacccggatcgcgaccttcaacgtcaatggcgtcaacggccgcctgcccgtgctcctg
aagtggttgaacgagaccgattatgacgttgtctgcctccaggagctgaaaacgtccgac
gagaaatttcccatcgaagcaatacaggacgccggcttcggcgccatctggcacggtcag
aaatcctataacggtgtggcaattctggcgcgtgggagggagccggtcgagcgccgccgc
ggcctgcctggcgatcccgacgacacgcacagccgctatctcgaggcggagatcgaaggt
ctcgtcgtcggctgcatctatctccccaatggcaacccggcgccggggcccaagttcgat
tacaagctgcgctggttcgagcgtctcaccgattacagcaaatcgctgctgggggagcgc
gccgtgctttgtggcgactacaacgtcgtgcccaccgagatagatgctgtggtccctcgg
cgttggttgggcgatgccgttttcttcccggaaagcaggaacgcctacgctcgcatgttg
agcctgggctgggtggatgcgatgcgacggatccacccggacaaaggcatctacacctac
tggaatttctcctatcgcggcggatacgaccggagctccggcctgcgcatggatcatctg
ctcgtaagcccgtccgtcgcggcaggcatccgagatgccggtgtcgacgtcgacacccgt
ggctgggaaaagcccagcgatcacgcgcccgcctggattgaggtgggaagataa
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