Mesorhizobium sp. J8: MJ8_33140
Help
Entry
MJ8_33140 CDS
T10402
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mesj Mesorhizobium sp. J8
Pathway
mesj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mesj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MJ8_33140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesj03019
]
MJ8_33140
Enzymes [BR:
mesj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MJ8_33140
Messenger RNA biogenesis [BR:
mesj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MJ8_33140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
BCM19536
LinkDB
All DBs
Position
3472798..3474255
Genome browser
AA seq
485 aa
AA seq
DB search
MTNENTLPSNDAGELSGFAALGIGGALLKATLAAGFTEPKPIQVQAIPPQLEGRDIFGIA
QTGSGKTAAFALPILSKIIGLGTKRRPKTARALILAPTRELAVQIEDTIKLLAKGAHIST
ALVLGGVSRFSQVKKIAPGVDILIATPGRLTDLVREGDLILADTKWLVLDEGDRMLDMGF
INDVKRIAKATASDRQTALFSATMPNEIAELAKGLLKDPVRIEVSPQSTTAAEIVQSVVL
ARTKQKRQVLSKMLADEAMRTVIVFSRTKHGADRVTKDLVRDGFEAAVIHGNKSQNARQK
ALNDFREGAVRILVATDIAARGIDVPGISHVVNFDLPDEAESYVHRIGRTGRNGRDGIAI
TLCDPSENAKLRQVERIIRMKLPVVADHLGSPDPQRDPKEKAERHFEPANDREHHGGRRD
GRRPGNGGGKKHFAGKPSGERGPKPQGERPAAAQPNGQRKPDGFKRFKGNNKRRFGGKRP
ANRAA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
ttgaccaacgaaaacactctccccagcaacgacgctggggaactctccggtttcgcagcc
cttggcatcggcggcgcgctgctgaaggccacgcttgccgcgggcttcaccgaaccgaag
cccatccaggtgcaggcgatcccgccgcagctcgaaggccgcgacatcttcggcatcgcc
cagaccggctccggcaagacggcggccttcgcgctgccgatcctgtcgaagatcatcggc
ctcggcaccaagcgccggccgaagacggcgcgcgcgctgatcctggcgccgacgcgcgag
cttgccgtacagatcgaggacaccatcaagctgcttgccaagggcgcgcatatctcgacc
gcgctggtgctcggcggcgtctcgcgcttcagccaggttaagaagatcgcgcctggcgtc
gacatcctgatcgccacgcccggacggctgaccgaccttgtgcgtgaaggcgacctcatc
cttgccgacaccaaatggctcgtcctcgacgagggcgaccgcatgctcgacatgggcttc
atcaacgacgtcaagcgcatcgccaaggcgaccgcgtcggatcgccagacggcgctgttc
tcggccaccatgccgaacgagatcgccgagctcgccaagggcctgttgaaggatccggtc
cgcatcgaggtctcgcctcagagcacgacggcggccgagatcgtgcagagcgtggtgctt
gcccgcaccaagcagaagcgccaggtactgtccaagatgctggccgacgaggcgatgcgc
acggtgatcgtgttctcacgcaccaagcacggcgccgaccgcgtcaccaaggaccttgtg
cgcgacggtttcgaagccgccgtcatccacggcaacaagtcgcagaacgcccgccagaag
gcgctcaacgatttccgcgagggcgcggtccgcatcctggtcgccaccgatatcgcggcg
cgcggcatcgacgtgcctggcatcagccatgtcgtgaatttcgatctgccggacgaagcg
gaaagctatgtccaccgtatcggccgcacgggtcgcaacggcagggacggcatcgcgata
acgctgtgcgatccttcggagaatgccaagctgcggcaggtcgagcgcatcatccgcatg
aagctgccggtcgttgccgaccatctcggcagcccggatccgcagcgcgaccccaaggaa
aaggccgagcgccatttcgagccggccaatgaccgcgagcatcatggcggccgtcgtgat
ggccgccgccccggcaatggcggtggcaagaagcactttgccggcaagcccagtggcgag
cgcggaccgaaaccgcaaggcgaacgcccggcggccgcccagccgaatggccagcgcaag
cctgacggcttcaagcgcttcaagggcaacaacaagcgccgcttcggcggcaagcgtccg
gcgaaccgggctgcttga
DBGET
integrated database retrieval system
