Mesorhizobium sp. J8: MJ8_37960
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Entry
MJ8_37960 CDS
T10402
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mesj Mesorhizobium sp. J8
Pathway
mesj03030
DNA replication
mesj03430
Mismatch repair
mesj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mesj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MJ8_37960
03430 Mismatch repair
MJ8_37960
03440 Homologous recombination
MJ8_37960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesj03032
]
MJ8_37960
03400 DNA repair and recombination proteins [BR:
mesj03400
]
MJ8_37960
Enzymes [BR:
mesj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MJ8_37960
DNA replication proteins [BR:
mesj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MJ8_37960
DNA repair and recombination proteins [BR:
mesj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MJ8_37960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
BCM20012
UniProt:
A0A7R7E7S3
LinkDB
All DBs
Position
complement(3957954..3961481)
Genome browser
AA seq
1175 aa
AA seq
DB search
MADERLLRDPLQREAAVKAARPEAPARTFIHLRVHSAYSLLEGALQLGAIVGHAVKDEAP
AIAVTDTNNLFGALEFAQKAVKDGVQPIIGCQVDLAFSGEASDGQRDRRRNGPEMSPVVL
IAASEDGYRNLVRLISKVYLETPPGEPVHLTSAQLEGRCDGLICLTGGPRGPIGSALKAD
RRDLAEQRLLFLKGLFGDRLYVELERVAGYDRMVEKSTVDLAYTHDLPLVATNEAFFSKR
EDYEAHDALIAIAEGSVVAADNRRRLSPDNFLRTQADMARLFSDLPEAIDNTVEIAMRCS
YYPKNRSPILPRFTGADAADKDAAEKAEAAELARQAREGLEKRLAAHGPTPGYTVEQYRE
RLEFELGIIERMKFPGYFLIVADFIKWAKSQGIPVGPGRGSGAGSLVAYSTTITDIDPLR
FSLLFERFLNPDRVSMPDFDIDFCQDRREEVIRYVQQKYGRDQVGQIITFGTLQARAVLR
DVGRVLQMPYGQVDKLSKMVPQNPANPVKLADAIANEPRFAEEAEKEPIVQTLLDTAQKL
EGLYRHASTHAAGIVIGDRPLSELVPMYRDPRSDMPVTQFNMKYVEQAGLVKFDFLGLKT
LTVLETAVKLIRRRGVDIDLARIPLDDKETYSMLSRGEVVGVFQVESAGMRKALIGMRPD
CIEDIIALVALYRPGPMENIPTYNARKHGEEELASIHPKIDHLVKETQGVIVYQEQVMQI
AQELAGYSLGEADLLRRAMGKKIRAEMDKQRERFVSGAVERGVSKPQADFIFDLLAKFAD
YGFNKSHAAAYAVVSYQTAYLKAHYPVEFLAASMTLDMSNTDKLADFRQDAMRLGIEVVA
PSVMTSFRPFEVGENKIFYSLAALKGVGDAAVEHIVEVRGEKPFKNLADFCERVDPKIVG
KRVFESLIMAGALDCFGHDRAQMMAGVERMMGLASLAQQNAISGQADIFGASLGSQSQAL
NLPATDPWLAADRLHREFQVVGFYLSAHPLDEYKAALQKMRVQNWAEFSAAVKRGAAAGR
LAGTVTTKQERKTRTGNKMGVVQFSDTTGQYEAVLFSEGLAQYRDMLEPGRSVVITVSAE
DRPEGINLRIQTVQSLEDEASRIQKALRIFVRDAAPLGTLANQLSVKGEGQVSFVLIKDA
GQGEIEIELPNRYRISPQVASAMRAVPGVVEVELV
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaacgacttctacgcgacccgttgcagcgcgaagcagccgtgaaggccgcg
cggccggaagcgccggcgcggaccttcatccatctgcgcgtgcattcggcctattcgctg
ctcgaaggcgcgcttcagctcggtgcgatcgtcggccatgcggtcaaggacgaggcgccg
gcgatcgcggtcaccgacaccaacaatttgttcggcgcgctcgaattcgcccagaaggcg
gtcaaggacggtgtccagccgatcatcggctgccaggtcgacctcgccttttccggcgag
gcgagcgacggccagcgtgaccgccgccgcaacgggccggaaatgtcgccggtcgtgctg
atcgccgccagcgaggacggctaccgcaatctggtcaggctgatcagcaaggtttatctg
gagacgccgcccggcgagccggtgcatctgaccagcgcgcaactggaggggcggtgcgac
gggctgatctgtctgaccggcggcccgcgcggtccgatcggcagcgcgctcaaggccgac
cggcgcgacctcgccgaacagcggctgctgttcctcaagggcctgttcggcgacaggctt
tatgtcgagctggagcgggtcgccggctacgaccggatggtcgaaaagtcgacggtcgac
ctggcctacacacacgacctgccgctggtcgccaccaacgaggcgttcttctccaagcgc
gaggactatgaagcgcatgacgcgctgattgcgatcgccgaaggctcggtggtagccgcg
gacaatcgccggcggctttcgccggacaatttcctgcgcactcaggcggacatggcgcgg
cttttctccgatctaccggaagcgatcgacaacacggtcgagatcgcgatgcgctgttcc
tattatcccaagaatcgcagcccgatcctgccgcgcttcaccggcgccgacgccgccgac
aaggacgccgccgagaaggccgaggctgcggagcttgcccgtcaggcgcgagagggtttg
gaaaagcgccttgcggcgcatgggccgacgcccggctacacggtcgagcaatatcgcgaa
cggctcgaattcgagctcggcatcatcgagaggatgaagtttcccggctacttcctgatc
gttgccgacttcatcaaatgggccaagtcgcaaggcattccggttggcccggggcgcggt
tcgggcgccggctcgctggtcgcctattccaccaccatcaccgatatcgacccgctgcgt
ttctcgctgctgttcgagcgcttcctcaacccggaccgcgtgtcgatgccggacttcgac
atcgacttctgccaggaccggcgcgaagaggtcatccgctacgtccagcagaaatacggg
cgcgatcaggtcgggcagatcatcaccttcggtacgctgcaggcgcgtgccgtgctgcgc
gacgtcggccgcgtgctgcagatgccttacggccaggtggacaagctatccaagatggtg
ccgcagaacccggccaatccggtcaagctggcggatgccatcgccaatgagccgcgcttc
gccgaggaggcggagaaggagccgatcgtccagacgctgctcgacacggcgcagaagctc
gaaggcctctatcgccacgcctcgacgcatgccgccggtatcgtcatcggcgaccgtccg
ctgtccgagctggtgccgatgtatcgcgatccgcgctcggacatgccggtcacccagttc
aacatgaaatatgtcgagcaggccgggctggtgaagttcgacttcctcggcctgaagacg
ctgacggtgctggaaacggcggtgaagctcatccgccgtcgcggcgtcgatatcgacctc
gcccgtattccgctcgacgacaaagagacttactcgatgctgtcgcgcggcgaggtggtc
ggcgtgttccaggttgaaagtgccggcatgcgcaaggcgctgataggcatgcggccggac
tgcatcgaggacatcatcgcgctggtggcgctctaccgccccggcccgatggaaaacatc
ccgacctacaacgccagaaagcacggcgaggaggagttggcctcgatccaccccaagatc
gaccatctggtgaaggaaacccaaggcgtcatcgtctaccaggaacaggtgatgcagatc
gcgcaggagcttgccggctactcgctcggcgaagccgatctgctgcgccgcgccatgggc
aagaagatccgcgccgagatggacaagcagcgcgagcgcttcgtctccggcgcggtcgag
cgcggcgtctccaagccgcaggccgacttcatcttcgacctgttggccaaattcgccgac
tacggcttcaacaagtcgcacgccgcggcctacgcggtcgtctcctatcagaccgcctat
ctcaaggcacattacccggtcgagttcctggccgcgtcgatgacgctcgacatgagcaac
accgacaagctggccgatttccgccaggacgccatgcgcctcggcatcgaggtggtggcg
ccatcggtgatgaccagcttccgcccgttcgaagtgggcgagaacaagatcttctattcg
ctggcggcgctgaaaggcgtcggcgacgcggcggtcgagcacatcgtcgaggtgcgcggc
gagaagccgttcaagaaccttgccgatttctgcgagcgggtcgatccgaagatcgtcgga
aagcgcgtcttcgaaagcctgatcatggccggcgcgctggattgcttcggccacgaccgc
gcccagatgatggccggcgtcgagcgcatgatgggcctcgcctcgctggcgcagcagaac
gccatatccggccaggccgacattttcggcgcctcgctcggcagccagtcgcaggcgctc
aacctgccggcgaccgatccgtggcttgccgcggaccggctgcatcgcgagttccaagtg
gtgggcttctatctctcggcgcatccgctggacgagtacaaggccgcgctgcagaagatg
cgggtgcagaactgggcggagttttccgcggcggtcaagcgcggcgccgccgcagggcgg
ctcgccggcaccgtcaccaccaagcaggagcgcaagacccgcaccggcaacaagatgggc
gtggtgcagttttccgacacgacgggccagtatgaggcggtgctgttctccgaggggctg
gcgcagtatcgcgatatgctggagcccgggcgatcggtggtgatcaccgtttcggccgaa
gaccggccggagggcatcaacttgcgcatccagaccgtgcaatcgctggaggatgaggcg
agccgcattcagaaggcgctgcgcatcttcgtgcgcgacgcggcacccctcggcacgctg
gccaaccagctttcggtcaagggcgaagggcaggtgagcttcgtgctgatcaaggacgcg
gggcagggcgagatcgagatcgagctgcccaatcgctaccgcatctcgccgcaggtggca
tcggcgatgcgcgcggtgcctggcgtggtcgaggtcgagctggtttag
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