Mesorhizobium sp. J8: MJ8_38400
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Entry
MJ8_38400 CDS
T10402
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mesj Mesorhizobium sp. J8
Pathway
mesj03410
Base excision repair
mesj03430
Mismatch repair
mesj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mesj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MJ8_38400
03430 Mismatch repair
MJ8_38400
03440 Homologous recombination
MJ8_38400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesj03400
]
MJ8_38400
DNA repair and recombination proteins [BR:
mesj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MJ8_38400
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MJ8_38400
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MJ8_38400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF2214
SOGA1-2-like_CC
Motif
Other DBs
NCBI-ProteinID:
BCM20056
UniProt:
A0A7R7E7U7
LinkDB
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Position
complement(4003829..4005613)
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AA seq
594 aa
AA seq
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MTGEKRFFLDVRQSATGVSWEHRLTERQDMAALAIAQGHGVPDIVARVLAGRGVSVEQTG
RFLDPTIRELLPNPASLTDMEKAAARLADAIVAREKVAIFGDYDVDGAASSALLKRFLTH
FSVPSEIYIPDRIFEGYGPNPEAMRELISRGAKLIVTVDCGTNSAASIEAAREAGADVVV
LDHHQVGGPLPPAAAVVNPNREDDLSGQGHLCAAGVVFLCLVQTAKVLRERLPNAAPVDL
LSLLDLVALATVCDVVPLTGVNRAFVVKGLQVLRQQKNEGLAALARVSRIGEPINTFHLS
FLIGPRINAGGRIGDAALGSRLLATDDPVEAASIAETLDRLNQERQQMEQEMLAQARAEA
DAELAGGNGPAVIVTASNSWHPGIVGLIASRLKDYARRPAFAIAFNSTGIGTGSGRSVTG
FDLGRLVREAAAAGLIVKGGGHAMAAGITVERARLGELRAFFEERAAADVFRLQNEESLA
IDGALAAEGATIALLDALEKAGPFGAGHIAPVFVLPRHRLADARAIGTNHIRVDLQSQSG
GNIQAIAFRAVDTALGEFLFKNRGRTVHVAGSLSGNYWNGNRTVQFRISDAALA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcgagaaacggttcttcctcgatgtcaggcagtcggcgacgggtgtttcctgg
gaacaccggctgaccgagcgacaggacatggccgccttggccatcgcgcagggccacggc
gtgccggacattgtggcgcgggtactcgccgggcgcggcgtcagcgtcgaacagaccggg
cgctttctcgatccgaccatccgcgagcttctgccgaatcccgcatcgttgaccgacatg
gagaaagcggcggcgcggctggcggacgcgatcgtcgcgcgtgagaaggtggcgatcttc
ggcgactatgacgtcgacggcgccgcctcatcggcgctcctgaaacgcttcctcacgcat
ttttccgtgccgtccgaaatctatatcccggaccgcatcttcgaaggctatgggcccaat
ccggaggcgatgcgggagctgatctcgcgcggcgcaaagctgatcgtcaccgtcgattgc
ggcaccaacagcgcggcctcgatcgaggccgcgagggaagcgggcgccgacgtcgtggtg
ctcgaccatcaccaggtcggcggcccgctgccgccggcggcggccgtggtcaatcccaat
cgcgaggacgacctgtcggggcagggacatctttgcgccgccggcgtcgttttcctgtgt
cttgtccagacggccaaggtgctgcgcgaaaggctgccgaacgccgcgccggtcgacctg
ctttcgctgctcgacctcgtcgccctggcgacggtctgcgacgtggtcccgctcacgggc
gtcaaccgcgccttcgtcgtcaagggactgcaggtgttgcgccagcagaagaatgagggg
ctggcggcgctggcgcgggtctcgcgcatcggcgagccgatcaacaccttccatctctcc
ttcctgatcgggccgcgcatcaatgccggcggccgcatcggcgatgccgcgctcggcagc
cggctcttggccaccgacgatcccgtcgaggcggcaagcatcgctgagacgctcgaccgg
ctgaatcaggaacggcagcagatggagcaggagatgctggcgcaggcgcgcgccgaggcc
gatgcggagcttgccggcggcaacggtcccgccgtcatcgtcacggccagcaacagctgg
catccgggcatcgtcgggctgatcgcctcgcggctcaaggattacgcgcgccggccggcc
ttcgccatcgccttcaattcgaccggcatcggcacgggctccggccgttcggtgaccggc
ttcgatctcggccggctggtgcgcgaggcagccgccgccgggctgatcgtcaagggcggc
ggccacgcgatggccgccggcatcaccgtcgagcgcgccaggctcggcgagctgcgcgcc
ttcttcgaggagcgggccgcagcggacgtgttccggctgcagaacgaggaaagcctggcg
atcgatggcgccctggccgccgagggcgccacgatcgcgctgctcgacgcgctcgagaaa
gccggcccgttcggcgccgggcatatcgcgccggtgttcgtgctgccgcggcatcggctg
gccgacgcgcgcgcgatcggcaccaaccacatccgggtggacctgcagtcgcaaagcggc
ggcaacatccaagccatagcgttccgcgccgtcgataccgctctcggcgaattcttgttc
aagaaccggggcagaaccgtgcacgtcgcaggttcgctgtcgggcaattactggaacggc
aaccgcacagtgcagtttcgcatcagcgatgcggccctggcttga
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