Mesorhizobium sp. J8: MJ8_50150
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Entry
MJ8_50150 CDS
T10402
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
mesj Mesorhizobium sp. J8
Pathway
mesj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mesj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MJ8_50150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesj03400
]
MJ8_50150
DNA repair and recombination proteins [BR:
mesj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MJ8_50150
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MJ8_50150
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
SWI2_SNF2
Kinesin
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
BCM21223
LinkDB
All DBs
Position
5263394..5266528
Genome browser
AA seq
1044 aa
AA seq
DB search
MARHPDKKTPSQDGAPKRRSPLTEFLDAAEPLEPGGFAEAPQADFIGAPLTGSISDWAGQ
IEREAERQPKPKAPKKIPERSSAPGRTARGTSMGGAASAKERAAAGLNPVAGLDISLEDA
EQVSSSGVTATVAALSKLIESGNPLHKDGQLWTPHRPARPEKSEGGIAIKMVSDFQPAGD
QPTAIKDLVEGIQQNDRTQVLLGVTGSGKTFTMAKVIEETQRPALILAPNKTLAAQLYAE
FKKFFPENAVEYFVSYYDYYQPEAYVPRTDTYIEKESSINEQIDRMRHSATRSLLERDDV
IIVASVSCIYGIGSVETYTAMTFQMQVGDRLDQRSLLADLVAQQYKRQDVNFVRGSFRVR
GDTIEIFPAHLEDRAWRISMFGDEIEAITEFDPLTGQKTGELKSVKIYANSHYVTPRPTL
NQAIKSIKEELQHRLQELEKAGRLLEAQRLEQRTRFDLEMLEATGSCAGIENYSRYLTGR
RPGEPPPTLFEYVPDNALIFIDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRP
LRFEEWDAMRPLSVAVSATPGAWELEQSGGVFAEQVIRPTGLIDPPVEVRPAKSQVDDVV
GEIRETTRLGYRTLVTVLTKRMAEDLTEYLHENGIRVRYMHSDIDTLERIEILRDLRLGA
FDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYADQ
ITGSMERAMAETNRRREKQMEWNAANGITPESVKSRIADILDSVYEKDHVRADISQFTDD
AGAMIGNNLKTHLEALDKQMRDAAANLDFEKAARIRDEIKRLREMELAISDDPLAREVES
QSPASGREKGKHNKGVARHRTAEEQERFRRLDEARAAEEAAKAARPNLFRKPHLDEMGAD
GAVPVKKPLFAKPSLDDMGPGTDMATPAGAVSRSLFKKQTAQEAHGSDFGIPGDRTKPLF
RKNSLDEMTVRRTEKPVEGKKPVKPQPISPVGGEMSGRTEGNAKDRDDSGKPIVRQRSGI
GSYEDPADERRQKRRPSKTGRPGR
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggccagacatcctgacaagaagacgccttcgcaagacggcgcgccgaagcggcgcagc
ccgctgaccgaattcctcgacgccgccgagccgctggagccgggcggcttcgcggaagcg
ccgcaggccgacttcatcggcgctccgctgaccggttcgatctccgattgggccgggcag
atcgagcgcgaggcggaaaggcagccgaagccgaaagccccgaaaaagatccccgagcgc
tcgtcggcgcccgggcgcaccgcgcgcggcacctcgatgggcggcgccgcctcggccaag
gagcgcgcggccgccggcctcaacccggtcgccggcctcgacatcagcctggaggacgcc
gagcaggtttcctccagcggcgtcacggcgaccgtcgcggcgctgtcgaaactaatcgaa
tccggcaatccgctgcacaaggacggccagctctggacaccgcaccgtccggcccggccg
gaaaagtccgaaggcggcattgccatcaagatggtgtcggatttccagccggccggcgac
cagccgaccgcgatcaaggacctcgtcgaaggcatccagcagaacgaccgcacccaggtg
ctgctcggcgtcaccggctcgggcaagaccttcaccatggccaaggtgatcgaggagacg
cagcgccctgccctgatcctggcgcccaacaagacgctggccgcgcagctctacgccgag
ttcaagaagttctttcccgaaaacgcggtcgagtatttcgtctcctactacgactattac
cagccggaggcctacgtcccgcgcaccgacacctatatcgagaaggaatcctcgatcaac
gagcagatcgaccgcatgcgccactcggcgacgcgctcgctgctcgaacgcgacgacgtc
atcatcgtcgcctcggtgtcctgcatctacggtatcggctcggtcgagacctatacggcc
atgaccttccagatgcaggtcggcgaccggctcgaccaacgctcgctgctggccgacctt
gtcgcccagcaatacaaacgccaggacgtcaacttcgttcgcggctcttttcgcgttcgc
ggcgatacgatcgagatcttcccggcccaccttgaggaccgcgcctggcgcatctcgatg
ttcggcgacgagatcgaggcgatcaccgaattcgatccgctgaccggccagaagaccggc
gagctgaaaagcgtcaagatctacgccaattcgcactatgtgacaccgcgcccgacgttg
aatcaagccatcaagtcgatcaaggaagaattgcagcatcgcctgcaagagcttgaaaag
gcaggccgtttgctggaagcgcaacggctggagcagcgcacgcgcttcgacctggagatg
ctggaggcgaccggttcctgcgccggcatcgagaactattcgcgctatctcaccggccgc
cgtcccggcgagccgccgccgaccttgttcgaatatgtgccggacaatgcgctgatcttc
atcgacgagagccatgtcaccgtgccgcagatcggcggcatgtatcgcggcgacttccgc
cgcaaggcgacgctggcggaatatggcttccgcctgccctcctgcatggacaaccggccg
ctgcgtttcgaggaatgggacgccatgcgcccgctgtcggtcgcggtttcggcgacgccg
ggcgcctgggagctggagcagtccggcggcgtcttcgccgagcaggtcatccgcccgacc
ggcctgatcgatccgccggtcgaggtgcgcccggccaagagccaggtcgacgatgtcgtc
ggcgagatccgcgagacgacgaggctcggctaccgcaccctggtcaccgtgctgaccaag
cgcatggcggaagaccttaccgaatatctgcatgagaacggcatccgcgtccgctacatg
cattccgacatcgacacgctggagcgcatcgagatcctgcgcgacctgcgcctcggcgcc
ttcgacgtgctggtcggcatcaacctgttgcgcgaaggcctcgacattcccgaatgcggc
ttcgtcgccatcctcgacgccgacaaggaagggttcctgcgttcggagacctcgctgatc
cagacgatcggccgtgcggctcgcaacgtagacggcaaggtcatcctctacgccgaccag
atcaccggctcgatggagcgcgcgatggccgagaccaaccgccgccgcgaaaagcagatg
gagtggaacgcggccaacggcatcacgccggaatcggtcaagtcgcgcatcgccgacatc
ctcgactcggtctacgagaaggaccacgtgcgcgccgacatctcgcagttcaccgacgac
gccggcgccatgatcggcaacaacctcaagacccatctcgaggcgctggacaagcagatg
cgcgacgccgccgccaatctcgacttcgagaaggccgcccgcatccgcgacgagatcaag
cggctgcgcgagatggagcttgccatctccgacgatccgctggcgcgcgaggtggaaagc
caaagccccgcgtcgggccgcgagaagggcaagcacaacaagggcgtggccagacaccgc
acggccgaggagcaggagcgtttccgcaggctcgacgaagcacgcgccgctgaggaggcg
gccaaggcggcccggcccaacctgttccgcaagccgcatctcgacgagatgggcgccgac
ggagccgtgccggtgaagaagccgctcttcgccaagccttcgctcgacgacatgggtcca
ggcaccgacatggcgacgcccgccggcgcggtgtcgcgctcgctgttcaagaagcagacg
gcgcaggaagcgcacggctccgatttcggcattcccggcgaccgcaccaagccgctgttc
cgcaagaactcgctcgacgaaatgacggtgcggcggacggaaaagccggtcgaaggcaag
aagccggtgaagccgcagccaatctcccccgttggaggggagatgtccggcaggacagag
gggaacgcgaaggaccgcgacgattccggcaagcccatcgttcgtcagcgttccggcatc
ggttcctacgaggatccggccgacgagcgccgtcagaaacggcggccgagcaagacgggg
cggccaggaagataa
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integrated database retrieval system
