Mesorhizobium sp. J8: MJ8_54980
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Entry
MJ8_54980 CDS
T10402
Name
(GenBank) RNA polymerase sigma-54 factor 2
KO
K03092
RNA polymerase sigma-54 factor
Organism
mesj Mesorhizobium sp. J8
Pathway
mesj02020
Two-component system
mesj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mesj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MJ8_54980
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MJ8_54980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesj03021
]
MJ8_54980
Transcription machinery [BR:
mesj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MJ8_54980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Arg_repressor
HTH_3
Motif
Other DBs
NCBI-ProteinID:
BCM21701
LinkDB
All DBs
Position
complement(5778633..5780162)
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AA seq
509 aa
AA seq
DB search
MALAAKLQLRQSQSLVMTPQLMQSIRLLQLTHVELERFIDEEIERNPLLERAEPQDDAVG
DQAQKGEAAPERDSDGDWFEGETEWSAEAISEKLDSSLENLFPDDPGTHERLGPDLTAQW
KSAAGGGAGTASSEGFDVGDMAAAVVTLREHVGEQIALASLSPGERLIAGELADGLDEAG
YLRADLGEIAARLGADDATVARVLGVCQTFEPPGLFARDLAECLSLQLAGRDRLDPAMKA
LVANLELLARRDFQTLKRICGVDEEDLLDMLAEIRALDPRPGLAFSGGASDAIVADVEVR
AANDGSWAVELNADTLPRVLVDNVYFARVSSHAKDQAEKDFLAECLQNANWLTRSLDQRA
KTILKVASEIVRQQDAFLVHGVRHLKPLNLRTVADAIGMHESTVSRVTANKYMLTPRGVF
ELRYFFTASIASAEGGEAHSSEAVRDRIKQMIDEEKPADVLSDDAIVDMLKESGIDIARR
TVAKYREGMNIASSVQRRREKRALANAGR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggcagccaaactgcagctcagacagtcccagtcgctggtgatgacgccgcag
ctgatgcagtcgatccgtctgctgcagctcacccatgtcgagctcgagcgcttcatcgac
gaggagatcgagcgcaacccgcttctggagcgggccgagccgcaggacgacgccgtgggc
gaccaggcccagaaaggcgaggcggcgccggagcgggattccgatggcgactggttcgag
ggcgagacggagtggagtgccgaagcgatctcggaaaagctcgattcctccctggaaaac
ctgtttcccgacgatcccggcacccatgagaggctggggccagacctcacggcccagtgg
aagtcggccgccggcggtggcgccggcacggcgtcatcggaaggattcgacgtcggcgac
atggccgcggccgtcgtcacgctgcgcgaacatgtcggcgagcagatcgcgcttgcttcg
ctgagccccggcgaacggctgatcgcgggcgagttggccgacgggctcgacgaagccggc
tatttgcgcgccgaccttggcgagatcgcggcccggctcggtgcggacgacgccacggtg
gcgcgcgtgctcggcgtctgccagaccttcgagccgccgggacttttcgcgcgcgacctt
gcggaatgcctctcgctgcaacttgcagggcgcgaccggctcgatccggcgatgaaagcg
ctggtcgccaatctcgagcttttggcgcggcgggatttccagacgctgaaacgcatctgc
ggcgtcgacgaggaggacctcctcgacatgctggccgagatccgtgcgctcgatccgcgt
cccggcctggcgttttcgggcggcgccagcgatgcgatcgtggccgatgtcgaggtgcgc
gcggccaatgacggcagctgggcggtggagctcaacgccgacacgctgccgcgcgtgctg
gtggacaatgtctacttcgcccgcgtctcgagtcacgccaaggaccaggcggaaaaggat
ttcctcgccgaatgcctgcagaacgccaactggctgacgcgcagcctcgatcagcgggcc
aagaccattctcaaggtggcgtcggaaatcgtgcggcagcaggatgccttcctcgtccat
ggcgtgcgccacctcaagccgctcaacctgcgcacggtggccgatgccatcggcatgcat
gaatcgaccgtcagccgcgtcaccgccaacaaatacatgctgacgccgcgcggcgtcttc
gagctgcgctatttcttcacggcatcgatcgcctcggccgaaggcggcgaagcgcattcg
tccgaagccgtgcgcgaccgcatcaagcagatgatcgacgaggaaaagcccgccgacgtg
ctttccgacgacgccatcgtcgacatgctgaaggaaagcggcatcgatatcgcccgccgc
accgtcgcgaaataccgcgagggcatgaatatcgcctcctccgtgcagcggcggcgggaa
aagcgggcgctggccaacgccggtcgctag
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