Mesorhizobium sp. J8: MJ8_60800
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Entry
MJ8_60800 CDS
T10402
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mesj Mesorhizobium sp. J8
Pathway
mesj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mesj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MJ8_60800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesj03019
]
MJ8_60800
03400 DNA repair and recombination proteins [BR:
mesj03400
]
MJ8_60800
Enzymes [BR:
mesj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MJ8_60800
Messenger RNA biogenesis [BR:
mesj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MJ8_60800
DNA repair and recombination proteins [BR:
mesj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MJ8_60800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
DUF7466
DACNK
AAA_22
AAA_30
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
BCM22266
UniProt:
A0A7R7I8M3
LinkDB
All DBs
Position
complement(6381224..6383068)
Genome browser
AA seq
614 aa
AA seq
DB search
MTPQAASIRAEDHKRRVLKDVFGFDDFRPGQATVIEALLSGRHVLAVMPTGAGKSLCYQV
PALVKGGLTIVVSPLVALMQDQVAALRLAGVAADTINSSLDRETNVAAWRRVASGQTRLL
YLAPERLMTERMLDALSRLDVGLIAIDEAHCISQWGPAFRREYEDLSRLRGLFPQVPIIA
LTATADEATRADIEARLFAGRAETLVLGFDRPNIKLAIEAKQDSKRQLLRFIERHQGKSG
IIYCLSRRKTEEMAAFLEKNGVRALAYHAGMSKEAREANQNAFMSLSGVVMVATIAFGMG
IDKPDVAYVFHTDLPGSLEAYYQEIGRAGRDGRAAEAHMLYGAGDIRTRRMFIDEEDTSP
EHKRRAHRRLDTLIGYCETAQCRRQVLLGYFGEEAQACGNCDNCLDRAPRADGSAEARII
LAAVAQSGERFGAAHVIDILLGHETEKVLARGHQKLESFRTGIMHRKPVWLSLVRQLVAG
GFLMPDPDGHGGLVISESGRALGRGEVAFEYRVEGRDRLARGRKRAAQGFAMDGEGVDAS
LLATLKTLRLRLAKERQVPAYVVFSDRTLIDMAERRPRDLDDFAEVTGVGAAKLKEFGEV
FLAAIAAHQADGSD
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
gtgaccccacaggcagcgagcatccgggccgaggaccacaagcggcgcgtcctgaaggac
gtgttcggcttcgacgatttccgccccggacaggcgacagtgatcgaggcgctgctctcc
ggacggcatgtgttggcggtgatgccgacaggcgccggcaaatcgctctgctatcaggtt
ccggcgctggtcaagggcgggctcaccatcgtggtgtcgccgctggtggcgctgatgcag
gaccaggttgccgccttgcgtcttgccggcgtggccgccgacactatcaattcctcgctc
gaccgcgagaccaatgtcgcggcctggcgccgcgtggcctccgggcagacgcggctgctc
tatctggcgccggagcggctgatgacggagcggatgctggacgcgctgtcgcggctcgat
gtcggcctgatcgccatcgacgaggcgcactgcatctcgcaatggggtccggccttccgg
cgcgaatatgaggacctgtcgcggctgcgcgggctcttcccgcaagtgccgatcatcgcg
ctgacggcgacggcggacgaggcgacgcgcgccgatatcgaggcgcggctgttcgccggg
cgggccgaaaccctcgtgctgggcttcgaccgacccaacatcaagctggcgatagaggcc
aagcaggacagcaagcgccagctgctgcgcttcatcgagcgccaccagggcaagagcggc
atcatctattgcctgtcgcgccgcaagacggaggaaatggcggctttcctggaaaagaac
ggcgtgcgcgcgctggcctaccatgccggcatgagcaaggaggcgcgggaggcgaaccag
aacgccttcatgagcctgtcgggcgtcgtcatggtggcgaccatcgccttcggcatgggc
atcgacaagcccgatgtcgcctatgtcttccacaccgacctgccgggcagcctggaggcc
tattaccaggagatcggccgcgccgggcgcgacggacgggcggcggaagcgcatatgctc
tacggcgccggcgacatccgcacgcgccggatgttcatcgacgaggaggatacctcgccc
gagcacaaaagacgggcgcaccgccggctcgacacgctgatcggctattgcgagacggcg
cagtgccggcgccaggtgctgctcggttatttcggcgaggaggcgcaagcctgcggcaat
tgcgacaattgccttgaccgggcgccgcgcgccgacggcagcgccgaggcgcggatcatc
ctggcggcggtcgcgcagagcggcgagcgcttcggcgccgcccatgtcatcgacatcctg
ctcggccacgagaccgaaaaggtgctggcgagaggccatcagaagctcgaaagcttcagg
accggcatcatgcacaggaagccggtctggctgtcgctcgtccggcaacttgtcgccggc
ggcttcctgatgcccgatcccgacggccatggcggtctcgtcatctcggaaagcggccgt
gcgctcgggcgtggcgaggttgcgttcgagtatcgtgtcgagggccgggaccgtctcgcg
cgcggcaggaagcgtgccgcgcaaggcttcgccatggatggcgagggcgtcgatgcgtcg
ctcctggcgacgctcaagacgctgcggctgcggctcgccaaggaacgccaggtgccggcc
tatgtggtgttctccgaccgcacgctgatcgacatggccgagcgccgcccgcgcgacctc
gacgatttcgccgaagtgaccggcgtgggcgccgccaagctcaaggagttcggcgaggtg
tttttagctgcgattgcggcgcatcaggccgatgggtcggactga
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