KEGG   Methanoregula sp. SKADARSKE-2: METHP_00928
Entry
METHP_00928       CDS       T09978                                 
Name
(GenBank) hypothetical protein
  KO
K03124  transcription initiation factor TFIIB
Organism
mesk  Methanoregula sp. SKADARSKE-2
Pathway
mesk03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mesk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    METHP_00928
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mesk03021]
    METHP_00928
Transcription machinery [BR:mesk03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     METHP_00928
 Prokaryotic type
  Archaeal type
    TFB
     METHP_00928
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF Sigma70_r4 Cas12f1-like_TNB Trm112p Zn_ribbon_SprT Zn_ribbon_LysW HTH_AsnC-type Ribosomal_S27e UPF0253 Lar_restr_allev Zn_ribbon_IS1595 A2L_zn_ribbon LUC7 Zn_ribbon_Elf1
Other DBs
NCBI-ProteinID: WML67401
LinkDB
Position
complement(806056..807060)
AA seq 334 aa
MQEVEKLKILQTEREALKSRTKVKEQEKKAENHTETVCPECGGRQLVHDYERAELVCQSC
GLVIDDDFIDRGPEWRAFDHDQRMKRSRVGAPMTFTIHDKGLSTMIDWRNRDSYGRAISS
KNRAQLYRLRKWQRRIRVSNATERNLAFALSELDRMASALGLPRNVRETAAVVYRDAVDK
NLIRGRSIEGVAAAALYAACRQCSVPRTLDEIAEVSRVSRKEIGRTYRFISRELGLKLLP
TSPIDYVPRFCSGLTLKGEVQSRAVEILRQAGERELTSGRGPTGVAAAAIYISSILGGER
RTQREVAEVAGVTEVTIRNRYKELAEKLDIEIIL
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgcaagaagttgaaaaattaaaaatcctccagaccgagagagaagctctcaagtcgaga
acgaaagtaaaagaacaggagaagaaggcggagaaccacaccgagactgtctgccccgaa
tgtggcggccgccagcttgtccatgactacgaacgggcagagctcgtctgccagagctgc
gggcttgttatcgacgatgacttcatcgaccgcggccccgagtggcgagccttcgaccac
gaccagcggatgaagcgatcccgtgtcggtgcgccgatgaccttcacgatccacgacaag
ggcctctcgaccatgatcgactggcgtaaccgggactcctatggccgggccatctcctcc
aagaaccgggcacagctctatcgtctccgcaagtggcagcgacgcatccgtgtcagcaat
gcgacagaacgcaaccttgccttcgccttatcggaactcgaccggatggcttccgctctt
ggtctcccgaggaacgtccgtgagaccgcggcggtcgtgtaccgcgatgcggtcgacaag
aacctgatccggggaaggagcatcgagggtgtggcagcagctgcgctctacgcggcctgc
cgccagtgcagcgtcccccggacactcgatgagatcgcagaagtctcccgggtctcgcgt
aaggagatcggcaggacctaccggttcatctcccgcgaactcggactcaagctcctcccg
acctcacccatcgattacgtcccgcggttctgctcggggctcacactcaagggcgaggtc
cagagccgtgcagtcgagatcctccggcaggccggggaacgcgagctgacaagcggcagg
ggccccaccggtgtcgcggcagcagcgatctacatctcctcaatccttggaggagagagg
cggacccagcgcgaggtcgcagaagtagccggtgtcactgaagtaaccatcaggaaccgg
tacaaggaactcgcagagaagctcgacatcgagatcattctttaa

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