Methanoregula sp. SKADARSKE-2: METHP_00928
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Entry
METHP_00928 CDS
T09978
Name
(GenBank) hypothetical protein
KO
K03124
transcription initiation factor TFIIB
Organism
mesk
Methanoregula sp. SKADARSKE-2
Pathway
mesk03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mesk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
METHP_00928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesk03021
]
METHP_00928
Transcription machinery [BR:
mesk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
METHP_00928
Prokaryotic type
Archaeal type
TFB
METHP_00928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cas12f1-like_TNB
Trm112p
Zn_ribbon_SprT
Zn_ribbon_LysW
HTH_AsnC-type
Ribosomal_S27e
UPF0253
Lar_restr_allev
Zn_ribbon_IS1595
A2L_zn_ribbon
LUC7
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-ProteinID:
WML67401
LinkDB
All DBs
Position
complement(806056..807060)
Genome browser
AA seq
334 aa
AA seq
DB search
MQEVEKLKILQTEREALKSRTKVKEQEKKAENHTETVCPECGGRQLVHDYERAELVCQSC
GLVIDDDFIDRGPEWRAFDHDQRMKRSRVGAPMTFTIHDKGLSTMIDWRNRDSYGRAISS
KNRAQLYRLRKWQRRIRVSNATERNLAFALSELDRMASALGLPRNVRETAAVVYRDAVDK
NLIRGRSIEGVAAAALYAACRQCSVPRTLDEIAEVSRVSRKEIGRTYRFISRELGLKLLP
TSPIDYVPRFCSGLTLKGEVQSRAVEILRQAGERELTSGRGPTGVAAAAIYISSILGGER
RTQREVAEVAGVTEVTIRNRYKELAEKLDIEIIL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagttgaaaaattaaaaatcctccagaccgagagagaagctctcaagtcgaga
acgaaagtaaaagaacaggagaagaaggcggagaaccacaccgagactgtctgccccgaa
tgtggcggccgccagcttgtccatgactacgaacgggcagagctcgtctgccagagctgc
gggcttgttatcgacgatgacttcatcgaccgcggccccgagtggcgagccttcgaccac
gaccagcggatgaagcgatcccgtgtcggtgcgccgatgaccttcacgatccacgacaag
ggcctctcgaccatgatcgactggcgtaaccgggactcctatggccgggccatctcctcc
aagaaccgggcacagctctatcgtctccgcaagtggcagcgacgcatccgtgtcagcaat
gcgacagaacgcaaccttgccttcgccttatcggaactcgaccggatggcttccgctctt
ggtctcccgaggaacgtccgtgagaccgcggcggtcgtgtaccgcgatgcggtcgacaag
aacctgatccggggaaggagcatcgagggtgtggcagcagctgcgctctacgcggcctgc
cgccagtgcagcgtcccccggacactcgatgagatcgcagaagtctcccgggtctcgcgt
aaggagatcggcaggacctaccggttcatctcccgcgaactcggactcaagctcctcccg
acctcacccatcgattacgtcccgcggttctgctcggggctcacactcaagggcgaggtc
cagagccgtgcagtcgagatcctccggcaggccggggaacgcgagctgacaagcggcagg
ggccccaccggtgtcgcggcagcagcgatctacatctcctcaatccttggaggagagagg
cggacccagcgcgaggtcgcagaagtagccggtgtcactgaagtaaccatcaggaaccgg
tacaaggaactcgcagagaagctcgacatcgagatcattctttaa
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integrated database retrieval system