Methanoregula sp. SKADARSKE-2: METHP_01258
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Entry
METHP_01258 CDS
T09978
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
mesk
Methanoregula sp. SKADARSKE-2
Pathway
mesk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mesk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
METHP_01258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesk03021
]
METHP_01258
Enzymes [BR:
mesk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
METHP_01258
Transcription machinery [BR:
mesk03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
METHP_01258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
WML67706
LinkDB
All DBs
Position
complement(1082694..1083869)
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AA seq
391 aa
AA seq
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MPLAEKYEKKVEAADLPQKTKDQLRKFLDEKELTDAQFKQILERVIAEYASTRIEACEAV
GIIAAQSIGEPGTQMTMRTFHYAGVAEINVTLGLPRLIEIMDARKEPSTPTMTVYLESDY
GVDRDRAREVSWQIEAAPLHEFGDITTDMENMQVQVHLNVKVCEKRKIATMEIMENAPKK
IKDKRHYRDFESDIDEPRATLIFTPKDKESYQNLFQLAEHVRNVIVQGIDDIIRVVVRKE
GGEYILYTEGSNLRDVFDVAGVDTTRTRTNNISEIASVLGIEAARNAIIHEAVSTLNEQG
ILVDVRHLMLVSDMMCMEGEVKQIGRHGIAGEKESVLSRAAFEVTVNHLLDAAVANEVDE
LSGVTENVIVGQPIQLGTGDVKLIAVRQQNN
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcgcagaaaagtacgagaagaaagtcgaagccgcagatctcccccagaagacc
aaggatcagctccggaaattccttgacgagaaggagctcacggatgcgcagttcaagcag
atccttgaacgcgtgatcgcggagtacgcgagcacgaggatcgaggcctgcgaagcggta
gggatcatcgcagcccagtcgatcggcgaacccggtacccagatgacgatgcgtacgttc
cactacgcgggtgtcgcggagatcaacgttactctcggtctcccccggctcatcgagatc
atggacgcaaggaaggagccgagcacgcctaccatgaccgtgtaccttgaatccgactac
ggtgtcgaccgtgaccgggcccgggaagtcagctggcagatcgaggccgcccccctccac
gagttcggggatatcaccaccgatatggagaacatgcaggtgcaggttcacctgaacgtg
aaggtctgcgagaagcgcaagatcgccacgatggagatcatggagaatgccccaaagaag
atcaaggacaagaggcattaccgggacttcgagagcgatatcgatgaaccccgtgcaacc
ctcatcttcaccccgaaggataaggagagttaccagaacctcttccagcttgcagagcac
gtcaggaacgtcatcgtgcagggtatcgatgacatcatccgggtcgtcgtcaggaaggag
ggtggggagtatatactttatactgaaggatccaaccttagagacgtatttgatgtagct
ggcgttgacaccacaagaacccgcaccaacaacatcagtgagatcgcgtccgtgctcggc
atcgaagccgcgcggaatgcgattatccacgaagcggtctccacgctcaacgagcagggt
atcctcgtggacgtccgccacctcatgctcgtctccgatatgatgtgcatggaaggcgaa
gtcaagcagatcggccgccacggtattgcgggcgagaaggagagcgttctctcgcgtgcg
gcgtttgaagtgacggtcaaccacctgctcgatgccgccgtggcaaatgaagtcgatgag
ctctccggtgtaaccgagaacgttatcgtcggccagccgatccagctcggtaccggcgat
gtaaaactcatcgcagtcagacagcaaaacaactag
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