Methanoregula sp. SKADARSKE-2: METHP_01261
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Entry
METHP_01261 CDS
T09978
Name
(GenBank) DNA-directed RNA polymerase subunit B''
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
mesk
Methanoregula sp. SKADARSKE-2
Pathway
mesk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mesk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
METHP_01261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesk03021
]
METHP_01261
Enzymes [BR:
mesk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
METHP_01261
Transcription machinery [BR:
mesk03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
METHP_01261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
WML67709
UniProt:
A0AA51QTC0
LinkDB
All DBs
Position
complement(1088323..1089891)
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AA seq
522 aa
AA seq
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MVSLIDRSILSRAYFSREHVARHQLDSFNYFLKYNLQKVVNEQRVIETDIENRGKNNDPV
WVELGNIEVKRPLVREADGSQGELYPSEARLRNLTYAAPIQLGLTLVHGEARQEPIVTTI
GQLPIMIGSSACNLYGMDDAQRVSHGEDAFDAGGYFIVNGTERVLMTLEDLASNKIMTEF
TERYNERIYVAKVFSQFRGYRALVVVERNKKNLLEVSFPSVAGHLKFVDLMRALGLTNDQ
EVVSAVSIDEDILTFMMQNLEESECDSVDGGVMYVGKKLAPNQTKDYQRKRAEFVLDNYL
LPHLNYAMPQNLKEGDEGYLEAVISVRLAKAHFLGRMAESCFDLVLNKRRIDDKDHYSNK
RLKLAGDLMEDLFRISLNRLTRDIKYQLERASMRHRDLSIATAVRADVLTERLLHPLATG
NWVGGRTGVSQLLDRVDHMAVLSHLRRVISPLSRSQPHFEARDLHPTQWGRICPSETPEG
PNCGLVKNFAQMVEISKGVTDEHEIMKILHNLGVENIRGESQ
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
ttggtcagtctgatagacagaagtattttatcgagggcatatttttcacgggagcatgtt
gcgcgccaccagcttgactccttcaactatttcttaaagtataatctccagaaagtggtc
aacgaacagcgtgttatcgagaccgatatcgaaaaccggggaaagaacaatgacccggtc
tgggtagaacttggcaatatcgaggtgaaaaggccgcttgtccgtgaagctgacggatcg
cagggtgaactgtatcccagcgaagcacgcctgcggaaccttacctacgccgcacctatc
cagctcggccttacgctggtacatggcgaagctcgccaggaaccaatagtcaccaccatc
ggccagctcccgatcatgatcgggtcgtccgcatgcaacctgtatggcatggacgatgcc
cagagggtctcccacggagaagacgcattcgatgccggggggtacttcattgtcaacgga
accgagcgcgtgctcatgaccttagaggatctcgcgtccaacaagatcatgaccgagttc
accgaacggtacaatgagcgcatctacgtggcgaaggtcttctcacagttccgcggatac
cgcgcacttgtcgttgtcgagcggaacaagaagaatctgctcgaagtctcgttcccgtcc
gttgccgggcatctcaagttcgtcgacctgatgcgtgcacttggcctgacaaatgatcag
gaagtcgtcagcgcagtctcgatcgatgaagacatcctgaccttcatgatgcagaacctc
gaagagagcgagtgcgactcggtcgatggcggggtcatgtatgtgggtaagaaactggca
ccaaaccagacgaaggattaccaacgcaagcgtgcggagttcgtgctggacaactacctc
ctgccccacctgaactatgcaatgccgcaaaatctcaaagaaggcgacgaaggatacctt
gaagcggtcatctcggtgaggcttgcaaaggcccacttccttggccggatggcagagtcc
tgtttcgatcttgtcctgaacaagcgcaggatcgatgataaagaccactactccaacaag
cggctcaaacttgccggagacttaatggaggacctgttccgtatatccttaaaccggctc
acccgtgatatcaagtaccagctcgagcgggcaagcatgcgtcatcgcgatctctcgatc
gcgaccgcagtacgtgccgatgttctcaccgaacgccttctccacccgcttgcgaccggt
aactgggtcggcggaaggaccggtgtctcacagctcctcgaccgtgtcgaccacatggcc
gtcctctctcacctgcgccgcgtgatctccccgctctcccgttcacagccccatttcgag
gcccgtgacctgcatccgacccagtggggccggatctgcccgagtgagaccccagaaggt
ccgaactgcggtctcgtgaagaattttgcccagatggtcgagatctcgaagggcgtcacc
gatgaacacgaaatcatgaagatcctccacaaccttggtgtcgagaatatccggggtgag
tcccagtga
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