KEGG   Methanoregula sp. SKADARSKE-2: METHP_02080
Entry
METHP_02080       CDS       T09978                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
mesk  Methanoregula sp. SKADARSKE-2
Pathway
mesk03030  DNA replication
mesk03410  Base excision repair
mesk03420  Nucleotide excision repair
mesk03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mesk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    METHP_02080
   03410 Base excision repair
    METHP_02080
   03420 Nucleotide excision repair
    METHP_02080
   03430 Mismatch repair
    METHP_02080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mesk03032]
    METHP_02080
   03400 DNA repair and recombination proteins [BR:mesk03400]
    METHP_02080
DNA replication proteins [BR:mesk03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    METHP_02080
DNA repair and recombination proteins [BR:mesk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     METHP_02080
   MMR (mismatch excision repair)
    Other MMR factors
     METHP_02080
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    METHP_02080
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9
Other DBs
NCBI-ProteinID: WML68455
UniProt: A0AA51M8U7
LinkDB
Position
complement(1831717..1832460)
AA seq 247 aa
MLKATIDADIFREFIDAISALVPECRLHTTENGLSTRAVDTANVAMVGLELKKEAFDSYT
ATTGQMGIDLSKMKNIFNMAAKSDLISLELPDNAQKMSVSVHGYHYSITLLDTNTIRKDP
NPPTISLPGKIVIAGEDFNNAMKTASVISDKIALGINPKDQVFYLVAEGDTDHIRREFGK
DEVTSLTPVEARSLFSLDYLKDMGKVMSKAAEVEIFLGIDHPVRFSFDIAGGNGHVEYLL
APRIEAD
NT seq 744 nt   +upstreamnt  +downstreamnt
atgttaaaagcaacgattgacgcagatattttccgggaatttattgacgcgatctcggcc
ctcgttcctgagtgccggctgcataccacggagaacgggctctctacgcgtgcggttgac
acggcaaacgtggcgatggtcggactcgaactcaagaaggaagccttcgactcgtacacg
gcaacaaccggccagatggggatcgatctctcgaagatgaaaaatatcttcaacatggcg
gcaaagagcgaccttatcagcctcgaactccctgacaatgcccagaagatgtcggtctcg
gtccacgggtaccactactcgatcacccttctcgatacgaacacgatccggaaggatccg
aaccccccgaccatcagcctgccgggaaagatcgtcattgccggtgaggatttcaacaac
gcgatgaagaccgcatccgtcatctccgacaagattgcgctcgggatcaaccccaaggac
caggtcttctacctcgtcgcggaaggggataccgatcatatccgccgcgagtttggcaag
gacgaagtgacgtctcttacacccgttgaggcacgctcgctcttctcgctcgactatctc
aaggatatgggaaaagtcatgagcaaggctgcagaagtcgagattttcctcgggatcgat
cacccggtacggttctccttcgatattgcgggtggcaacggccacgtcgagtacctcctc
gcaccgcgtatcgaggctgactga

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