Methylobacter sp. S3L5C: KKZ03_02410
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Entry
KKZ03_02410 CDS
T08037
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mesl
Methylobacter sp. S3L5C
Brite
KEGG Orthology (KO) [BR:
mesl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesl03032
]
KKZ03_02410 (topA)
03400 DNA repair and recombination proteins [BR:
mesl03400
]
KKZ03_02410 (topA)
Enzymes [BR:
mesl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KKZ03_02410 (topA)
DNA replication proteins [BR:
mesl03032
]
Prokaryotic type
DNA Topoisomerases
KKZ03_02410 (topA)
DNA repair and recombination proteins [BR:
mesl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KKZ03_02410 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_GRF
M1AP_C
Motif
Other DBs
NCBI-ProteinID:
UOA09191
LinkDB
All DBs
Position
504266..506590
Genome browser
AA seq
774 aa
AA seq
DB search
MSKNLVIVESPAKAKTIEKYLGKDFQVLASYGHVRDLIPKEGAVDPTHDFAMKYEVIDRN
QRHVQAISKALKAADTLYLATDPDREGEAISWHLLELLREKKLLKEKPVHRVVFHEITKK
AVTEAIANPEKLDINLINAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRMIV
ERELEIEAFKNREYWTIDAALTAHEQNFKAKLTQFAGEKLTQFSITDEALAEKTKQALLT
TADGQLLVAKLEKKQQKRNPAPPFITSTLQQEASRKLGFTTKRTMIVAQQLYEGIDIGGE
TEGLITYMRTDSVNLSVEAVEEMRTLIAEKYGADNVPKEPRLFKTKSKNAQEAHEAIRPT
YPRHLPSQIKDHLSIEQYKLYDLIWKRTIACQMIHATLNMVAVDLTCGDGQHSFRATGST
IAIPGFMAVYLEGKDDSKESDDKESFLPPLEEGRPVTLNDIIAAQHFTEPPPRYGEASLV
KSLEEHGIGRPSTYASIISTLQNREYVTLDSKRFYPTDVGRIVNKFLTEHFTKYVDYDFT
ANLEDELDAVSRGEKDWIPLMHEFWKPFHTTVQEKDASVQRKDVTQEAIDEKCPTCDSPL
SIRLGRNGRFIGCTNYPECSYTRNLNDDAGASDEPETVEGRTCPDCDSPLIFKTGRYGKF
IGCSAYPTCRHIEPLEKPADTGVECPQCSKGSILKRKSRNGKIFYSCSGYPKCNYALWNM
PVNEPCPQCSWPILTVKETKRHGVEKVCPQKECSYATPYEGDPADAQGPKEVVD
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaatcttgtcattgtagaatctcctgcaaaagcaaaaactatcgagaaatat
ttaggtaaagactttcaggttttagcctcttatggacacgtccgcgaccttattccaaaa
gaaggtgccgttgaccctacccatgattttgccatgaaatatgaagtcattgatcgcaat
cagcgtcatgttcaggctatcagcaaagcacttaaagccgcagacactttatatctggca
accgatcctgatagagaaggcgaagctatttcctggcatttgcttgaactgctgagagaa
aagaaattactcaaagaaaaaccggtacatcgcgtagtctttcatgaaatcactaaaaaa
gccgtcactgaagccattgccaatccggaaaagttggacatcaatttaattaacgcccaa
caagcgcgacgagcgttggattatctggttggctttaatttgtcaccgttattatggaaa
aaaatccgccgtggcctttcagccggacgcgtacaaagccctgccttacggatgatagtt
gaacgtgagttggaaattgaagccttcaaaaaccgtgaatactggactattgatgctgca
ttgacagcgcatgaacaaaattttaaggccaaactaacccagtttgctggtgaaaaactg
actcaattcagtattaccgatgaagccttggcagaaaagaccaagcaggcactactaaca
acagccgatggccagttactggtagccaaactggaaaagaaacagcaaaaacgcaaccct
gcgccgccttttataacctcgactttgcaacaggaagcctcaagaaaactgggctttacc
actaaacgcaccatgatagttgcccaacaactgtatgaaggtattgatataggtggcgaa
accgaaggcctgattacctatatgcgtaccgattcggttaacttgtcagtagaagccgta
gaagaaatgcgtacgctgattgcagaaaaatatggcgctgataatgtacctaaagaaccc
agactgttcaaaaccaaatcaaaaaacgcccaagaagcacatgaggccatacgccccact
tacccaagacatttaccgagtcagataaaggatcacctcagcattgaacaatacaagctg
tacgatctaatctggaagcgcaccatagcctgccaaatgattcatgcaacgcttaatatg
gtcgctgttgatttaacctgtggtgacggccaacatagcttcagagcaacaggttctacc
attgccatccctggatttatggcagtttatctggaaggcaaagatgacagcaaagaaagt
gatgataaggaaagctttttaccaccacttgaagaaggccggccagtcactctcaacgat
attattgccgctcaacattttactgagccaccaccacgttatggcgaagccagtctggta
aaatcgcttgaagaacacggcataggtcggccttcaacgtacgcctccattatttccacc
ctgcaaaaccgcgaatatgtcactctggacagtaaacgtttttatcctaccgatgtaggc
agaattgttaataagtttttgactgagcactttacgaaatacgttgattatgattttacc
gctaatttagaagatgagttagacgctgtttcccggggtgaaaaagactggattccatta
atgcatgaattctggaagccttttcatacaaccgttcaggaaaaagatgccagcgttcag
cgtaaagatgttacccaagaagcgattgatgaaaaatgtccgacctgtgacagcccatta
tccatccgtctgggtagaaatggtcgatttataggctgcaccaattatcctgaatgttcc
tatacccgtaatttgaatgatgatgcgggcgcttccgatgaaccggaaacagtagaaggc
agaacctgccctgattgcgattcgccgttaatttttaaaacaggtcgctatggtaaattc
atcggttgcagcgcttatccaacttgtcgacatattgaacccttggaaaagcctgccgat
accggtgtcgaatgtcctcaatgcagtaaaggctcgatacttaaacgcaaatcacgcaat
ggaaaaatattttactcctgctcgggctacccaaaatgtaactacgcactttggaacatg
ccggttaatgagccctgtccgcaatgtagctggcctattttgacagtaaaagaaaccaaa
agacatggtgttgaaaaagtctgcccacaaaaagaatgcagctatgccactccttatgaa
ggcgaccctgccgatgctcagggccctaaagaagtagtcgattaa
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