Methylobacter sp. S3L5C: KKZ03_03520
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Entry
KKZ03_03520 CDS
T08037
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mesl
Methylobacter sp. S3L5C
Brite
KEGG Orthology (KO) [BR:
mesl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesl03016
]
KKZ03_03520 (truD)
Enzymes [BR:
mesl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
KKZ03_03520 (truD)
Transfer RNA biogenesis [BR:
mesl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KKZ03_03520 (truD)
Prokaryotic type
KKZ03_03520 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UOA09390
LinkDB
All DBs
Position
complement(716754..717788)
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AA seq
344 aa
AA seq
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MIVNTQTIEIPVWPYVYGQPSGSGKIRSIPEDFIVKENLAFEPSGTGEHAFLQIEKSGEN
TDYVARQLARFANVRQRDVSYAGLKDRHAVTTQWFSVWLPGKADPDWSQFETDSMKVLQA
VRHARKLKRGVLSGNSFTLVVRDWQGDKDKTIQQLEAIKVNGMANYYGSQRFGNEGQNVN
KALAMFAGAKVGREQRSLYLSAARSYLFNQILADRVISKNWDQPVAGDTYQFDLSHSCFK
SEFPDAEIIRRLEIKDMHPTGALWGKGDAGVSGDTLSLEQAVIDATPELAKGLVASGVDK
DRRALRVNVQELQWQFVTDSVVELCFTLPAGSYATSVLREIIEL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcaacacgcaaacgattgaaatcccggtatggccttacgtttatggtcaacct
tccggttccggtaaaatccgtagtattcccgaagactttattgttaaagaaaatttggct
tttgaaccatctggtacgggagaacatgcctttttgcaaatagaaaagagcggggaaaat
accgattatgtcgccaggcaactagcaagatttgccaatgtcaggcaacgtgatgtcagt
tacgcggggttaaaagatcgacatgcggttaccacacaatggtttagtgtctggttgccc
ggcaaagctgatccggactggtcgcagtttgaaacagacagcatgaaagtattacaggcg
gtacgccatgcccgcaaactaaagcgcggtgtattgtcaggtaacagttttacactggtc
gttcgggattggcaaggtgataaagataaaactattcagcagttggaagccataaaggtc
aacggcatggctaattattacggctctcaacgctttggtaatgaaggccaaaacgttaat
aaagcgttggcaatgtttgctggtgccaaagttgggcgagaacaacgcagtctgtattta
tctgccgcacgttcgtacttgttcaaccagattttagctgatcgggttatcagtaaaaac
tgggatcagccggttgcgggtgatacttatcaatttgatctttcgcatagctgttttaaa
tcggagtttcctgatgctgaaattattcggcgattggagataaaagatatgcatccgacg
ggtgcgttatggggaaaaggcgacgctggtgtatcaggtgatacgctaagccttgaacaa
gctgttatcgacgcaactcctgaactggcaaagggtttggtcgcttctggcgttgataaa
gatcggcgtgcattacgggttaatgtgcaggagttacagtggcagtttgttactgacagt
gtagtcgagctttgttttactttgcctgcaggcagttatgcaacgtcagtattacgtgag
attatcgagctgtaa
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