Methylobacter sp. S3L5C: KKZ03_04700
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Entry
KKZ03_04700 CDS
T08037
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mesl
Methylobacter sp. S3L5C
Pathway
mesl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mesl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
KKZ03_04700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesl03019
]
KKZ03_04700
03009 Ribosome biogenesis [BR:
mesl03009
]
KKZ03_04700
04131 Membrane trafficking [BR:
mesl04131
]
KKZ03_04700
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mesl04147
]
KKZ03_04700
Messenger RNA biogenesis [BR:
mesl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
KKZ03_04700
Ribosome biogenesis [BR:
mesl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
KKZ03_04700
Membrane trafficking [BR:
mesl04131
]
SNARE
SNARE associated proteins
Others
KKZ03_04700
Autophagy
Aggrephagy
Other aggrephagy associated proteins
KKZ03_04700
Exosome [BR:
mesl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KKZ03_04700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
AAA_2
AAA_14
CDC48_2
AAA_22
AAA_33
nSTAND3
TIP49
Zeta_toxin
AAA_18
Rad17
IstB_IS21
NPHP3_N
Sigma54_activat
Mg_chelatase
AAA_17
AAA_28
TsaE
Sigma54_activ_2
RNA_helicase
ABC_tran
AAA_7
AAA_3
NTPase_1
Molydop_binding
SKI
Vps4_C
Motif
Other DBs
NCBI-ProteinID:
UOA09594
LinkDB
All DBs
Position
complement(1002634..1004778)
Genome browser
AA seq
714 aa
AA seq
DB search
MSEELKLKVVEALPKDIGRGYARLDPADMAKLNLSVGDIVQLSSNKGKGIAKLMPTYTDL
RGKSVVQLDGLTRSNAGLSLDDKADIKSIPCKHATRITLIPTTITPSPRDMDYIGSLLDG
LPVQKGDLLRAHLFGSRSAEFKVDSTVPEGAVLINPTTTLVIGSSGQAKGAGPGKQRLSY
EDVGGLKGQVRRIREMIELPLRYPEVFERLGIDAPKGVLLSGPPGCGKTLIARIIAQETD
AQFFTISGPEIVHKFYGESEAHLRKIFEEAGSKGPSIIFLDEIDSIAPHRDKVVGDVEKR
IVAQLLALMDGLKSRGKVIVIAATNLPNAIDPALRRPGRFDREITIPIPDREGRREIIEI
HSRGMPLNDDVDLNVVADVTHGFVGADLEALCREAAMSALRRLLPEIDFSAAEIPYERLA
ALTVTMDDFRAALCEVSPSAIRELFVDIPDVRWEDVGGLDDLRRRLIESVQWPIKYPELY
QQAGVKPPKGLLLAGPPGVGKTLIAKAIANESGVNVISVKGPALMSRYVGDSEQGVRELF
HKARQASPCIIFLDEVDSVVPARGEGSTDSHVAERVLSQFLSEMDGLEELKGVFVMGATN
RADLIDPAMLRPGRFDEIIELGLPNEEARQQILAVHLRNKPLGENIHVEDLAARCIDASG
AELAALCNRAALAALRRTVQQNYNDEVPIKLDVRIEQYDFYTVIAEMFGDEAIR
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaacttaaacttaaagtcgttgaggctttgccaaaagatataggacggggt
tacgcacgtttagatcctgctgatatggctaaactaaatctgtcagtcggtgatatcgtt
caattaagcagtaataaaggtaaaggcattgctaaattaatgccaacgtatactgacctg
cgcggtaaaagcgttgtgcagttggatggattgaccagaagcaatgcaggtctgagtttg
gatgacaaagctgacattaaatcgattccctgtaaacacgcgacgcgaattaccttaatt
ccaacgacgattacaccgagtccccgagacatggattatattggcagtttacttgatggc
ctgccggtacaaaaaggcgatttgttacgcgcacatttatttggtagtcgttctgcagaa
tttaaagtcgacagcactgtacccgaaggagctgtcctgattaatccaaccacaacgttg
gtgattggaagttcgggtcaagctaagggagcggggcctggtaaacaacgcttgtcttat
gaagatgttggaggtcttaaaggtcaagtacgacgtattcgggaaatgattgaactgcct
ttgcgttatcctgaggtatttgaacgtctaggtatagatgcacccaaaggagtgctactt
agcggccctccaggttgtggtaaaacgctgatagcccgcattattgcacaagaaacagac
gcccaattctttactatcagcggtccggagatcgtgcacaagttttacggtgaaagtgaa
gcgcatttacgcaaaatttttgaggaagcagggagtaaaggccccagtattatttttctg
gatgaaattgattccattgctccgcatcgtgataaggtcgtcggtgatgtagaaaaacgt
atcgtcgctcaattactggcattaatggatggcttgaagagccggggcaaagttattgtt
attgcggcgaccaatctgcctaatgctattgatccggctttgcgccgtccagggcgtttt
gatcgagaaattactattcctattccagaccgcgaaggtcgccgtgaaattatcgaaatt
catagtagaggcatgccgcttaatgacgatgttgatctgaacgtcgttgccgatgtcacc
cacggttttgtcggtgctgacttggaagccttatgccgcgaagctgcgatgagtgcgttg
cgccgcttactgcctgaaattgattttagtgcggcagaaataccttatgagcgactggca
gcgttgacggtaacgatggacgattttcgtgccgctttgtgtgaagtctcaccatcagcc
attcgtgagctatttgttgatattcctgatgtgcgttgggaagatgtcggtggcctggat
gatttacgtcgtcgtttgatagaatctgtgcaatggccgattaaataccctgagctttat
caacaagctggcgttaaaccacctaaaggcttgttgttggcaggccctccaggtgttggt
aaaaccctgattgctaaagccattgccaacgaaagtggcgttaacgtcatctcggttaaa
ggtcctgccttgatgtcgcgttatgttggtgattctgaacaaggtgtgcgagaactgttt
cacaaagcccgtcaagcttcaccgtgtattatttttctggatgaagtggactcagtcgtg
cccgcgcgtggcgaaggctcgactgactctcatgtagccgagcgtgtattgagtcaattt
ttatcggaaatggacggcttggaagagcttaaaggggtttttgtcatgggggcgaccaat
cgtgcggatttgatagatcctgcgatgttacgtccagggcgttttgatgagatcattgag
ctgggtttacccaatgaagaggcgcggcaacaaattctggcagtgcacttgcgtaataaa
ccgttgggggaaaatattcatgttgaagacttggctgctcgttgcattgatgccagtggt
gctgaattagcagcgctatgtaaccgtgcagcccttgctgcattacgtcgcacggtacaa
caaaattacaatgatgaagtaccaataaaactcgatgtacgtatagagcaatatgatttt
tatactgtgattgcagagatgtttggcgatgaggctattcggtga
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