Methylobacter sp. S3L5C: KKZ03_05720
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Entry
KKZ03_05720 CDS
T08037
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mesl
Methylobacter sp. S3L5C
Pathway
mesl03030
DNA replication
mesl03410
Base excision repair
mesl03420
Nucleotide excision repair
mesl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mesl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KKZ03_05720 (polA)
03410 Base excision repair
KKZ03_05720 (polA)
03420 Nucleotide excision repair
KKZ03_05720 (polA)
03440 Homologous recombination
KKZ03_05720 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesl03032
]
KKZ03_05720 (polA)
03400 DNA repair and recombination proteins [BR:
mesl03400
]
KKZ03_05720 (polA)
Enzymes [BR:
mesl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KKZ03_05720 (polA)
DNA replication proteins [BR:
mesl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KKZ03_05720 (polA)
DNA repair and recombination proteins [BR:
mesl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KKZ03_05720 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KKZ03_05720 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UOA09767
LinkDB
All DBs
Position
complement(1238203..1240917)
Genome browser
AA seq
904 aa
AA seq
DB search
MSQQTQKRLILIDGSSFLFRAYHAIPPLTNPLGEPTNAVYGVSNMLRKLIADYQSDYITV
VFDAPGKTFRNDLYDQYKAHRPPMPDDLRVQIEPLHHLIRAMGLPLIMEPDVEADDVLGA
LAQYAEGQGFDVIISTGDKDMAQLVTDHIILENTMSNTRMDIQGVIDKFGVKPEQIIDYL
ALMGDSSDNIPGIPKVGPKTAAKWLEQYETLENLVANADKITGKIGESLRASLHQLPLAK
QLTTIKCDLNLPYDMEDLKRNPINTAELKQMLAELGFLSWFKMLDNQVETIVVKEEAKPA
LIESSYEIILTHQQFDQWFEQLENAQLFAFDTETTSLDYSKAEIVGVSFSVTAGKAAYIP
LAHNYAGAPDQLNRTEILEKLRPLLENPNKAKLGQNLKYDAHVLANHGITLRGIAHDTML
ESYVLNSTATKHNMDDLAKEYLGLTTIHYEEVAGKGAKQIPFQEVTIEQAAPYAAEDADI
TLQLHQVLMAKLQQHPALLTLYSEIEVPLISVLARIESNGVLIDTAMLSQQSLELASHIV
AIEQMAHDLAGHTFNLGSPKQIQEILYDQLKIPVLKKTPKGQPSTAESVLQELAIDYPLP
KLILDHRSLSKLKSTYTDKLPQQVDDKTGRVHTSYHQAVAATGRLSSSNPNLQNIPIRSE
EGRKIRQAFIAPQGYKIVAADYSQIELRIMAHLSADAGLLKAFSAGEDVHKATASEVFGV
AVDQVTTDLRRSAKAINFGLIYGMSSFGLAQQLGLSRSQAQSYIDLYFTRYPGVKNYMDR
IRDQAREQGYVETLFGRRLYLPEIKSRNAARRQYAERTAINAPMQGTAADIIKRAMIGTD
QWLLKEKPDAKMIMQVHDELVFEVAEDQIECYSAMIRNIMSSAADLSVPLIVDIGVGNNW
DEAH
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaacaaacacaaaaacgcctgattctgattgacggctcctcttttttatttcgt
gcttatcatgcaattccacccttaaccaatcctctgggcgaacctaccaacgccgtttac
ggcgtgtccaacatgctgcggaaactgatagccgactatcaaagtgactacatcaccgtg
gtttttgatgcgccaggtaaaacctttcgcaatgatctttatgaccaatataaagctcac
cggccgccgatgcctgacgatttgcgcgtacaaattgaacccttgcaccacttgattcgg
gctatgggtttacccttgattatggaacctgatgttgaagccgacgatgttctcggtgcc
ttggcgcaatatgcggaagggcaaggttttgatgtcattatttctactggcgataaagac
atggcacaactagtcaccgaccatattatcctggaaaataccatgtccaacacgcgcatg
gatattcagggtgttatcgacaagtttggtgtcaaaccggaacagattattgattatctg
gcattaatgggcgatagcagcgacaatattcccggcatacccaaagtgggtccaaaaacg
gcggcaaagtggctggaacagtacgaaaccctggaaaatctggtcgctaatgccgataaa
attaccggtaaaattggtgaaagcttgcgtgccagcctgcatcagctgccgttggccaaa
caactgacaaccatcaaatgtgatcttaatttaccttatgacatggaggatttaaaacgt
aaccctataaatacggccgaactaaaacaaatgttagccgaactgggatttttatcgtgg
tttaaaatgctcgataaccaggtagaaaccatcgttgttaaagaagaagctaaaccggct
cttatcgaatccagttatgaaatcatactgacccatcagcagtttgatcaatggtttgaa
caactcgaaaatgcacaactgtttgcttttgacaccgaaaccaccagccttgattacagt
aaagcagagatagtcggcgtttccttttcggtaactgctggtaaagccgcttatatcccg
ttagcccataattatgcgggtgcacctgaccagctaaatcgtactgaaatactggaaaaa
ctccgtccactacttgaaaaccctaataaagccaagttggggcaaaatcttaaatatgac
gcgcatgtacttgccaatcacggcataaccctgcgaggcatcgctcatgacaccatgctg
gaatcttatgtcttaaacagcacggcaaccaaacataatatggatgatcttgccaaagaa
tatttaggattgacgactattcattatgaagaggttgccggcaagggcgcgaaacaaatc
ccgtttcaggaagtaaccatcgaacaagccgctccatatgccgctgaagatgcggatatt
actttgcaactgcatcaagttctgatggccaagctgcaacaacacccagccctgctgacc
ttatattcggaaatagaagtcccgctgatcagtgtgcttgcgcgtattgaaagcaatggc
gtactgattgatacggccatgctgtctcagcaaagtctggaactggccagtcatattgtc
gctattgaacaaatggctcatgacctcgcaggacatactttcaatttaggttcaccaaaa
caaattcaggaaattctttacgaccagctaaaaatacctgttttaaagaaaacacctaaa
ggccaaccctcaactgcagagtcggtactacaggaactggcgattgattatccattgccc
aagctgattctggatcaccgtagcttaagcaaattaaaatcgacttataccgacaaactg
ccacaacaagttgatgataaaaccggtcgtgtacacacgtcgtatcatcaagcggtagcc
gctaccggcagactatcgtcttccaatcccaacttgcagaacatccccatccgcagcgaa
gaaggccgcaaaatacgacaagcgtttattgcaccgcaaggctataaaatcgtggccgct
gattattcgcaaattgaattacggattatggcacatttatctgctgatgccggcttgcta
aaagcctttagcgctggcgaggatgttcacaaggcaacagcatcagaagtatttggtgta
gctgttgatcaagtgaccactgatttgcgccgttccgcaaaagcgattaacttcggactg
atttacggcatgtcttcttttggtctggcgcaacaactgggtttgtcacgtagtcaggcg
caatcgtatatagacttgtattttacccgttatccgggcgttaaaaattatatggaccgt
atcagggatcaagcccgtgaacagggctatgtggaaaccttatttggtcgccgcttatat
ttacccgaaataaaatcacgtaatgcagcgcgccgccaatatgctgaacgcactgctatt
aatgcacccatgcaaggcactgctgccgatattattaaacgcgccatgattggtactgat
cagtggttacttaaagagaaaccggatgcaaaaatgattatgcaagttcacgatgaactg
gtatttgaagtggcagaagatcaaatagaatgctatagcgccatgattagaaatattatg
agttcagccgctgatttaagtgtaccgctgattgttgatataggagtgggtaataactgg
gacgaagcgcattaa
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