Methylobacter sp. S3L5C: KKZ03_08815
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Entry
KKZ03_08815 CDS
T08037
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mesl
Methylobacter sp. S3L5C
Pathway
mesl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mesl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KKZ03_08815 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesl03400
]
KKZ03_08815 (recB)
Enzymes [BR:
mesl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KKZ03_08815 (recB)
DNA repair and recombination proteins [BR:
mesl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KKZ03_08815 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UOA10313
LinkDB
All DBs
Position
complement(1941956..1945672)
Genome browser
AA seq
1238 aa
AA seq
DB search
MTVANSLNPLDFPLSGTRLIEASAGTGKTYTIAALYVRLILGHGQDQDQDQDKTLPSRNL
LPPDILVVTFTDAATKELRERIRDRLTEAASYFRGQFSECDDFLEPLRDSYDSDKWPTCA
RQLELAANWMDESAVYTIHGWCNRMLQQHAFDSGSLFRQEVNTDDTELLNQVVRDYWRTF
FYPLSEISCQVPLKLTDSPEALTKLLKPLLSETEALGLECLVTDIATVFKSWETWEKKRR
ELEKQARHLWATDKIKIEKLLKNASENRWLNGNQYRQATFNSKLSDLGAWAQRGVNEDID
TLVKFGQQRLLSGLVKAHQDKTEPLQHKAFQAIDDLAGHVEQETEVTETLTLHAIHWIRN
RYDTEKQRAAHMTFDDMLTRLDKALQSESGERLASVIRQQYPIALIDEFQDTDPVQYRIF
ANLYPANVDNGLGCFMIGDPKQAIYSFRGADIYTYLKAHQVTAGRHYTLGTNFRSTKALV
DAVNQVFFAADQQTEGAFQFKSKQANPLPFIAVDAKGRKEEWVINGKVAPALTLWHWDSP
EAVGMPDYREQMAEVAASEIVRLLNCANQGKTGFTSQSGIIQPLQPSDIAILVRSGTEAK
AIRNALGRRRLRSVYLSERDSIYATNEASDLLLWLKALAEPRNERKVRAALSTAVLGWSY
EALHQLTIDEPSWEQQLERFLGYQQRWQQDGILPTLRQLMNDYGLHARLLTENDGERCLT
NLLHLAELLQQASAQLEGEQALIRHLAEEIAAADQAAEENIIRLESDANLIKIITIHKSK
GLEYPLVFLPFICSFREVSSRYSHYYRYHDDRQNLCIDLSKDDAIKNISDRERLQEDLRL
FYVAITRAKHACWLGFAPIKSGSGKACQLEKTAIGYLLGWKPKMPANELAAKLTQLKGAC
KAIVIAGLPEPTQAIYQPSQQHELMDLPLQSITTIADNWWIASYSALQTEHKNTGQQLDR
KLSDVPETAQEDKQSDEADVYVGSLTKTLSGIHSLPRGAGPGVLVHELLEQCAQRGFKAM
LEKPDDCRLLIDKIFSHKTWDDKRDIIATTVMQWLTMPLLEGSSFRLADLEVDDYQAELE
FLVGAEDVSIQALDHLVTLHTFSGKPRPRLLPAQVNGLLKGFIDLIFVHNRQYYIADYKF
NGLGNNDAAYTQETMETAMLAKRYDLQYALYLLALHRLLKVRMGDSYDYDTHIGGGLYLF
LRGVNGPLSGRIFHKPPKALIEGMDMLFLGSNKHGEIV
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcgcaaactcattaaatccgcttgattttccgttatccggcacccgcctgatt
gaagccagcgccggtaccggcaagacctacaccatcgcggcactgtatgtgcgcctgatc
cttggtcatggtcaagatcaagatcaagatcaagataagacgttgccaagtcgtaactta
ttgccgcctgatattttagtggtgacttttactgatgcggcaacgaaagaattgcgcgag
cgtattcgtgaccgtcttaccgaagctgccagttattttcgtggccagtttagtgagtgt
gatgactttctggaaccgctacgcgacagctacgattctgataaatggccgacttgtgcc
cgtcaattggaactggcggccaactggatggacgaatcggctgtgtacactattcatggc
tggtgtaatcgaatgttgcagcaacatgcttttgatagtggcagtctgtttcgtcaagag
gtcaataccgatgatacggaactgctaaatcaagttgtacgcgattattggcgaactttt
ttctatcccttatctgaaatatcgtgtcaagtgccgctaaaactgacagattcaccagaa
gcattaaccaaactactgaaacctttactgtctgaaacggaggccttggggcttgaatgc
cttgtcactgacatagcaacggtctttaaaagctgggagacttgggagaaaaaacggcga
gaactggaaaaacaggcacgccatttatgggccaccgataaaattaaaatagaaaaactg
ctaaaaaatgcctccgagaaccgctggttaaacggcaatcaatatcggcaagccactttt
aacagcaagttgtcggacttgggcgcatgggcgcaacgtggtgttaatgaggatattgat
accctggttaaatttggtcaacaaagattgctgtcagggctggtcaaagcccatcaagac
aaaactgaaccattacaacacaaggcatttcaagccattgatgatctggccggtcatgtt
gagcaagaaacagaagtaacagaaaccctgactttacatgccattcactggatcagaaac
cgttacgataccgaaaaacaacgtgccgctcacatgacctttgacgacatgctgacacga
ttggataaagccctgcaaagtgagagtggagagcgactggcaagcgtgattcgccagcaa
tacccgattgcgttaattgatgaatttcaggataccgaccccgtgcaataccggattttt
gccaatctgtatccggcaaacgtggataacggcctgggttgttttatgattggcgatccc
aaacaagcgatctattcgtttaggggggccgatatttatacttatcttaaagcccatcag
gtcacagcggggcgacactacaccttgggaaccaactttcgttctaccaaagcgttggta
gatgctgttaatcaggtattttttgccgcagatcaacaaactgaaggggcatttcaattt
aaaagtaagcaagccaatccgttaccgttcatcgccgtcgatgccaaaggccgcaaagag
gaatgggtgattaatggaaaagtagcgccagcgttaacgctctggcattgggactcaccg
gaggccgttggcatgccggactatcgcgagcaaatggccgaagtggccgccagcgagatc
gtgcgcttactgaattgtgccaatcagggtaaaaccggatttacatcccagtcgggtatc
attcagcccttacaaccctccgacattgccattttagtgcgtagcggcacagaagccaaa
gccatccgtaatgcgctgggaagacggcgactacgtagcgtttacctttctgaacgtgat
tccatttatgcaaccaatgaggcctctgacctgttgctttggctaaaagcactggccgag
ccccgtaatgagcgtaaggtacgtgcggcgttaagcaccgctgttttaggctggtcgtat
gaggcacttcatcaactcaccatcgatgaaccaagctgggaacaacaattggaacgcttt
cttggctaccaacaacgttggcaacaagatggcatcttgccgaccttacggcaactaatg
aatgattatggcttgcatgcgcgactgctgacagaaaatgacggtgaacgttgtttaacc
aatctgctgcatttggcagaattgcttcaacaagccagcgctcaactcgaaggcgaacaa
gcattaatacggcatctggctgaagaaattgctgccgccgatcaggccgctgaagaaaat
atcattcgcctggaaagcgatgccaacctgatcaagatcatcaccatccataaatccaaa
ggccttgaatatccgttggtattcttgccttttatctgtagtttcagggaagttagtagt
cgttacagccactattatcgctaccatgatgaccggcaaaacttatgtattgatttgagc
aaagacgatgctattaaaaatatcagtgatagagaaaggcttcaggaagatttacgcctg
ttttatgttgccattacccgggcaaaacatgcctgttggttaggttttgctcccattaaa
agcggttctggcaaagcctgtcagttggaaaaaacagccataggttacttgctgggctgg
aaaccaaaaatgcccgccaatgagttggctgctaaactgactcagcttaaaggagcttgt
aaggctatcgtgattgccggcttacccgagcccactcaggctatttatcagccttcgcag
caacacgaactaatggatttaccgctgcaatcaattaccactattgctgataactggtgg
atagccagttacagcgccttgcaaaccgagcacaaaaacacgggccaacagcttgatcgt
aagctgtctgacgtccctgaaacggctcaggaagataaacaaagtgatgaagcggatgtt
tatgttggctcattaacaaaaaccctgtccggcatccatagcctgccccgaggtgcaggt
cccggcgtgttggttcatgaattactggaacagtgcgcgcagcgtggctttaaggcgatg
ctggaaaaaccggatgactgccgactactgatcgacaagatttttagccacaaaacctgg
gatgataaacgcgatattattgccacgacagtcatgcaatggttaaccatgccgttactg
gaagggtcttcttttagattggctgatcttgaagttgatgattaccaagctgaacttgag
tttcttgttggtgcagaggatgtcagtattcaggccttggatcatttggttaccctgcat
accttttccggtaaacccaggccacgtttattaccggcacaggtaaacggtttattgaaa
ggctttattgacttgatattcgtccataaccggcaatactacattgccgattacaaattt
aatggccttggcaataacgatgccgcgtacacacaagaaacaatggaaacggcaatgtta
gccaaacgctatgatttgcaatatgccctgtatctgttggccttgcaccggttattaaaa
gtcagaatgggcgacagctacgattacgatacccatatcggcggcggtctttatctgttt
ttacgcggcgtaaatggcccgttaagtggcagaattttccataaaccgccgaaagcattg
attgaaggtatggatatgctgtttttgggttcaaataagcacggagaaatagtatga
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