Methylobacter sp. S3L5C: KKZ03_08820
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Entry
KKZ03_08820 CDS
T08037
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mesl
Methylobacter sp. S3L5C
Pathway
mesl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mesl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KKZ03_08820 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesl03400
]
KKZ03_08820 (recC)
Enzymes [BR:
mesl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KKZ03_08820 (recC)
DNA repair and recombination proteins [BR:
mesl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KKZ03_08820 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
KIAA2026_hel
Motif
Other DBs
NCBI-ProteinID:
UOA10314
LinkDB
All DBs
Position
complement(1945669..1949154)
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AA seq
1161 aa
AA seq
DB search
MTETSYKTSLDSGIAVIHSNKLEALGDVVEYWLREHPLAPLENEVFLVQSNGMGQWLQQS
LAKNSALGIAGAIKVQLPSAFIWAVYRSVLGSQIPKEQLLAKAPLTWRLYRLLPTLITRP
EFEILATFLAVDNNSRKRYQLAEQLADLFDQYQVYRSDWIADWAAGLDSLRDSHGQSQIM
PEQQRWQAALWRAVLADLGDQYTPYASRAAVHTQFMTQIDTQEQRPVDMPRRIIVFGLSS
LPQQSLEVLAKLGKFCQIVLFVHNPCQHYWADIIEDKALLKAERRRQAYKSGMTSALTDE
ELHLHAQPLLAAWGKQGRDYIRLLDQFDDTQTYANWHWPESKIDLFKDYCEPGQGSLLQQ
LQQSILDLEPLPTEPVDLPEVDNSLMFHIAHSPQREVEILHDQLLARFNSAENLKPRDII
VMVPDINKYAPHIRAVFGNIKSGDSRYIPYSLADQQQRGQNPLLVAAEALLNLPDSRFAV
SEFLGLLEVPALRLRFSIDEAAIPKLHQWVEEAGIRWGLHAEQRTQNVAMPKDLEANTWQ
FGLRRMLLGYAVGAGIAFNAIEPYDEIGGLDAQWVGGLSYLLETLEKQANLLRKSQNYTD
WQETLSALLEDFFDVTSSEEERKTLEILGHSLTRWGEICEQAGLTDDDTLPLNVVREAWL
ATVDEPNLQQRFLSDRINFCTLMPMRAIPFRLICLLGMNDGDYPRSQPAQSFDLMSQRGQ
YRPGDRSRRQDDHYLFLEALLSARQQLYISWIGRNIRDNSERPPSVLISQLRDALALGWQ
LENNEPKLLKALTVEHPLQPFSKQYVAKNRDSRLFTYAREWFEPSASVSLANATPAVVYE
KTLTLGLQSLGRFLKAPVKTFCNNTLKFGFDQETITSEDNEPFGFNKLESYVLRQNLLDA
LQSETPDNPDTFLEQQRTTMARQGKLPLGGFAHAAYADIADPVNQVWQRYQTLLTLWPKA
IEARIIDLHFVLADDITVQLTGELINLRQNSDDLTQGLIHLTPQTLLGNTGKIKYPNLLA
YWVQHLAGCAAGMNLQTLVMGSDCVIEIALLEQTAAFAQLNTLVTAWYLGMQAPLPVACK
TAFAWLGASPDNAMDIAKSTYQGDDWTKGEVAYDAYLARFFPTFSHLNQTTVQGDFKAWT
QTLYGAAFTQINQQTAQDAQS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaacaagctacaaaacctcgctggacagcggcattgcagtcattcactccaat
aaactggaagcgttgggagatgtggtcgaatactggctgcgcgaacatcctttggcaccg
ttggaaaatgaagtatttctggtgcaaagtaatggcatggggcaatggttacagcaaagc
ctggcgaaaaatagtgcgttaggtattgccggagcgattaaagtgcaattaccctcagcg
tttatctgggctgtttatcgttcggtattgggctcacagattcccaaagaacaactgctg
gcaaaagcgcccttgacctggcgcttgtaccgtttgttgccgacgctgattacccgacct
gagtttgaaattttggcgacatttttggcggtcgataacaacagccgcaaacgctatcag
ctcgctgaacagctggctgatctttttgaccaatatcaggtgtatcgatcggactggatt
gccgattgggcagccgggcttgatagcttgcgtgatagccatggacaaagccagatcatg
ccggaacaacaacgctggcaggccgcattatggcgggcagtattggcggatttaggcgat
caatatacgccctacgccagtcgtgcagccgttcatacgcaatttatgactcaaattgat
acacaggaacagcgtcctgtcgacatgccacggcgaataatagtgtttggcttgtcatcg
ttaccccagcagtcgcttgaagtattagccaaactgggcaaattttgtcagatagtcttg
tttgttcataacccttgccaacattactgggcagacattattgaagacaaagcgctgtta
aaagctgaacgccgtcgccaagcttataaatccggtatgacaagcgcattgaccgacgaa
gaattacatctccacgcacaaccgttgctcgctgcctggggtaaacaaggacgtgattat
attcgcttgctggaccagtttgacgatacccaaacttatgcaaactggcattggccggag
agcaaaattgatctgttcaaagattactgcgaacccggacaaggcagtctgttgcaacaa
ttacaacaatcgatactggatttggaaccgctacctaccgagcctgtcgacctgcctgaa
gtcgataattccctgatgtttcatattgctcatagtccgcagcgtgaagtcgaaattctt
cacgatcagctattagcccgctttaattcagctgaaaacttaaagccacgagatatcatt
gtcatggtaccggatatcaataaatacgcaccacatatccgtgcggtatttggcaatatc
aagtccggtgattcccgctacattccttacagcctggccgatcaacaacagcgaggtcaa
aatcccttgctggtcgccgctgaagccctgcttaatctgcctgactcgcgttttgccgtt
agcgaatttctgggcttgcttgaagtaccagccctaagactacgtttttccattgatgaa
gccgctattcccaaattgcatcaatgggttgaagaagccggcatccgctggggattacat
gcagaacaacgcacgcaaaatgtagcgatgcctaaagatctggaagccaatacctggcaa
tttggtttacgcagaatgttgctcggttatgccgtgggggccggtatcgcatttaatgcc
attgagccttacgatgaaattggcggactcgatgcacaatgggtcggtggcctgtcatac
ctgttggaaactcttgagaaacaggccaacttgctgcgaaaaagccaaaattataccgac
tggcaagaaacattatcagcgcttttggaagatttttttgatgtcaccagcagcgaggaa
gaacgaaaaacgctggagatacttggccactcattaacaagatggggagaaatctgcgaa
caagccggcttaaccgatgacgatactttacccttaaacgttgttcgtgaagcatggctg
gctacagtagatgaacccaatctccagcagcgtttcttaagtgaccggattaatttctgt
acactgatgccgatgcgggccatcccttttcgactgatttgcttactgggcatgaatgac
ggcgattatccacgcagtcaacccgcacaaagctttgatctgatgagtcaacgcgggcag
tatcgtcccggtgaccggtcacgcaggcaagatgatcactatttgtttttggaagccctg
ctttcggcacgacaacaactttatatcagttggataggccgcaacattcgcgataatagc
gagcgtccgccatcagtactcatcagtcagttacgcgatgcactggccctgggctggcaa
ctggaaaataacgaaccgaagttacttaaagccttaaccgttgaacacccgctacaacct
tttagtaaacagtatgtggccaaaaatcgtgattcgcgcttgttcacatacgcccgggaa
tggtttgaaccatcagcgtcagtcagtttagccaacgcaaccccggcggttgtctatgaa
aaaacgttgacgctgggtctgcaatctttgggacgttttttgaaagcaccggtaaaaact
ttctgtaataacaccctcaagtttggcttcgaccaagaaaccattaccagcgaagataac
gaaccttttggctttaacaaactggaaagctatgtgctacgccaaaatttactggatgcc
ttgcaaagtgaaacaccagacaatcctgatacttttttagaacagcaacgcacgaccatg
gccaggcaaggtaaactcccgctcggcggtttcgctcacgcagcgtatgcggatattgcc
gatcccgttaatcaggtttggcagcgctaccagacactgctgactttatggcccaaggca
attgaagcacgtattattgatttacattttgtcctggctgacgacatcactgtccagcta
accggtgaattaattaatttacggcaaaatagcgatgacctgactcagggattgattcac
ttgacgccgcaaaccttactgggcaatacgggcaaaataaaatatcccaacctgttagcg
tactgggtacaacatctcgccggctgtgcagcaggtatgaatttacagacactggtgatg
ggttctgattgcgtgattgaaattgccctgcttgaacaaacagcagcctttgcacaactt
aacaccctggttacagcgtggtatctgggtatgcaagcgccgttaccggttgcctgtaaa
acggcatttgcctggttgggcgcatcaccggataacgccatggatattgcaaagtctacc
tatcagggtgatgactggaccaaaggtgaagtagcctacgatgcctatctcgcgcgtttt
ttcccgactttttctcatttaaaccagacgacggtacaaggtgattttaaggcttggact
caaacgctttatggcgcggcatttactcaaatcaatcaacaaactgcacaggatgcgcaa
tcatga
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