Methylobacter sp. S3L5C: KKZ03_14850
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Entry
KKZ03_14850 CDS
T08037
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mesl
Methylobacter sp. S3L5C
Pathway
mesl03410
Base excision repair
mesl03430
Mismatch repair
mesl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mesl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KKZ03_14850 (recJ)
03430 Mismatch repair
KKZ03_14850 (recJ)
03440 Homologous recombination
KKZ03_14850 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesl03400
]
KKZ03_14850 (recJ)
DNA repair and recombination proteins [BR:
mesl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KKZ03_14850 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KKZ03_14850 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KKZ03_14850 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
UOA07536
LinkDB
All DBs
Position
complement(3326544..3328289)
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AA seq
581 aa
AA seq
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MYYQGVKKNIVTRTIKKNSSLEGTIHPLLKRLFLARGITSETELDRTLSKLPSPWLLSGM
EAMVTHLITAINEQQRICIVADFDADGATSCAVAIKGLQLLGAGQVSFVVPNRFEYGYGL
TPEIVELVKLQTPDVIITVDNGISSIDGVKTATDAGIKVLVTDHHLPGLELPAADAIVNP
NLPDDKFPSGALAGVGVIFYVLMALRSRLREQNWFEKKQLPEPNLAQLLDYVALGTVADV
VALERINRILVHQGLMRIRTGHCHPGLQALIEVSGKNPQTLVSSDLGFSVGPRLNAAGRM
DDMSLGIQCLLTDDPALAKDIALQLDQLNNDRREVEAVMKHEAMAYLSDMKALDEHHLPA
GVCLFDSNWHQGVIGILASRIKDRVHRPVIAFAPAGKDLIKGSARSIPGVHIRDVLSDIA
AAHPKLLSKFGGHAMAAGLSLNMHDYPAFALAFDEMVSKRLANVDLEQKILSDGELTEQE
MTLEIADLLQYSATWGQEFPEPVFDGIFDVIQARIVGQRHLKLVLRKPDGDLVIDAIAFF
VDQPEHWLGLRQIRTAYKLDINEFRGNRSVQFIIQYFEKIV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtattaccaaggcgtaaaaaaaaacatagtaacccgcacgattaaaaaaaatagttca
cttgagggaaccattcaccctctgttaaaacgcctgtttttagctcgcgggatcacttca
gaaacagaattggacagaaccctgtcaaaactaccctctccatggctgttatcgggtatg
gaagccatggttacccatttgataacagccatcaatgagcagcaacgaatttgtattgtt
gccgattttgatgctgacggggcaaccagttgcgctgtcgctatcaaaggattgcagtta
ctgggggcagggcaggtgtcctttgtcgtccctaatcgttttgaatatggctacggtttg
actcccgaaattgtcgaattggttaagctgcaaactcctgatgtaattattaccgttgat
aatggcatatctagtattgacggtgtaaaaactgcaacagatgccggtataaaagtgctg
gtaacggatcatcatctacccgggcttgagcttcccgccgctgatgccatcgtcaaccca
aatctaccggatgataaatttcccagcggagcactggccggcgtcggagttatattttat
gtattaatggctttgagaagccggttaagggaacaaaactggtttgagaaaaaacaactg
ccagaacctaatcttgcccaattattagattacgttgctttgggtactgttgctgatgtc
gttgcgttggaacgtattaaccgcattctggtacatcagggcttaatgaggattcgcacc
gggcattgccatccaggcttacaggcacttattgaagtctcggggaaaaatcctcaaacc
ctagtctcatcggatttgggtttttcagtgggcccccgcttaaatgcagcgggacgcatg
gatgatatgtccttaggtattcaatgtttattaacggatgatcctgcccttgcaaaagac
atcgcgcttcaacttgatcagttgaataatgaccgacgtgaagttgaagccgttatgaaa
catgaggcaatggcttatttaagtgacatgaaagcgcttgatgagcatcatttaccggca
ggtgtctgtttatttgacagcaattggcatcaaggtgttatcggtattttagcctcacgc
ataaaagatcgcgtacatcggccggtgattgcctttgctcctgccggtaaagatttgata
aaaggttccgcacgctctattccaggtgtacatattcgtgatgtattaagcgatattgcc
gcagcccaccctaagctactcagtaaatttggcggccatgccatggcggcaggtttaagc
ttaaatatgcatgactatcctgcttttgccctggcttttgatgaaatggtcagcaaacgt
ttggctaatgttgatttggaacaaaaaatattgtccgatggtgaattgaccgagcaggaa
atgacgcttgaaatcgctgatttattacagtattcagcaacctggggacaagagtttcca
gaacctgtttttgacggcatatttgatgtgattcaggcgcgtattgttggccagcgccat
cttaaactggtattaagaaaacctgatggcgatctggtcatcgatgcgatcgcatttttt
gttgatcagcctgagcattggctgggattaagacaaataaggaccgcttacaagctcgat
attaatgagtttagaggcaatcgaagtgtacagtttattatccagtattttgaaaaaata
gtataa
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