Methylobacter sp. S3L5C: KKZ03_17180
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Entry
KKZ03_17180 CDS
T08037
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mesl
Methylobacter sp. S3L5C
Pathway
mesl03030
DNA replication
mesl03430
Mismatch repair
mesl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mesl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KKZ03_17180 (dnaE)
03430 Mismatch repair
KKZ03_17180 (dnaE)
03440 Homologous recombination
KKZ03_17180 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesl03032
]
KKZ03_17180 (dnaE)
03400 DNA repair and recombination proteins [BR:
mesl03400
]
KKZ03_17180 (dnaE)
Enzymes [BR:
mesl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KKZ03_17180 (dnaE)
DNA replication proteins [BR:
mesl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KKZ03_17180 (dnaE)
DNA repair and recombination proteins [BR:
mesl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KKZ03_17180 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
UOA07958
LinkDB
All DBs
Position
3802601..3806101
Genome browser
AA seq
1166 aa
AA seq
DB search
MQPAFIHLRLHTEFSLVDGIVKIKPLIKRLAELNMPAVGITDHANLFSLVKFYKTALGNG
VKPIAGADVLIFNPEEPVTPYRLTLLVNNHTGYITLTELISKAYQEGQHQGVPMLRQEWL
KANHQGLIALSGAMSGDIGKALLAENHEEAKRLAMQWGALFEQSFYLELIRVGKPDEERY
IAAAVDLALATDLPVVATNDVRFIHQKDFSAHEVRVCINQGRVLDDSRRPKDYTDQQYLR
STEEMLALFADIPEALANTVEIAKRCNLKLTLGENFLPDFPVPEGMNLGEFMAEESMKGL
EERLQHYPAVGKGSDEENRRVYYDRLDFELKMITQMGFPGYFMIVADFIQWAKKNLIPVG
PGRGSGAGSLVAYALKITDLDPIEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDYVA
RHYGRDHVAQIITYGSMAAKAVIRDVGRVLGFAYGFVDRLAKLIPFEIGMTLTKALKDSP
ELKQLYDTTEEVRTLIDMALSLEGTVRNAGKHAGGVVISPTKLTNFTPLYCDQDGNNLVT
QFDKDDVEAVGLVKFDFLGLRTLTIIDWALQDINAKHKLLGKPLVDITTIPRDDPASYKL
LTNAQTTAVFQLESRGMKELIKKLKPDCFDDIIALVALFRPGPLESGMVDDYINVKHGAK
AEYAHPLLVPILKPTNGVILYQEQVMQIARELALYTLGGADMLRRAMGKKKAEEMAKERE
KFTTGAVENQVDEPIATYVFDLMEKFAGYGFNKSHSAAYALVAYQTAWLKVHFPAEFMAA
VLSADMDNTDKVVVLIEECRQMKLAILPPTLNVSTYRFAVNDDNHIVYGLGAIKGVGQAA
IEDMLIERNNNGPFSGLYDLCKRVDLRKFNRRVLDALIRAGAFDEFDDNRARHLAELPTA
LRAAEQHGKMAQTGQNDLFSLPGSDSETENNDNTVDNTDAYAAIIQPWSDKERLAAEKQT
LGLFLTGHPIDQYESELKNFTHGKIGTLQVSRGNVEARIAGLVVEVRTRQTKQGKTMGFA
TLDDKTGRLECAVFGEVYEKYRGIFTRDNLLIAEGSLGIDNFSGGLRLMVEKLYDMDQAR
ESFSRGIKLTWNAPKNKPEEEHYIDRLSEALAPFKGGSCPVSINYTSQHAQATVQLGDEW
RIHPTDELISRLKSLFGSTAIEVRYR
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccagcatttattcatttaagacttcataccgaattttcactggtagatggcatc
gtaaaaataaaaccactcattaagcgcttggctgaattaaatatgcctgcggttggaatt
actgatcacgccaatttgttttcgctggtcaaattttataaaacggctttgggcaatggc
gttaagccaatagcgggcgctgatgtactgatttttaatcctgaagaacctgtcacccct
tatcgcttaaccttgctcgtcaataatcacacaggttatatcaccctgactgaattaatt
tcaaaagcttatcaggaaggtcagcatcagggtgtacctatgcttaggcaagaatggctg
aaagcaaaccatcagggcttaattgctttgtctggcgcaatgagcggcgatattggcaag
gccttactggcagaaaatcatgaagaagccaaacgcctggcaatgcaatggggtgcgtta
tttgaacaaagtttttatctggaattaattcgcgttggcaaacccgacgaagagcgttat
attgccgctgccgttgatcttgcattagcaaccgatttaccggtggttgccactaatgat
gtgcgctttattcatcaaaaagatttttctgcccatgaagtacgggtttgtattaatcag
ggacgtgtattggatgattcgcggcgccccaaagattataccgaccaacagtatttacgt
agcaccgaagaaatgctggcattatttgccgacatccctgaagccttggcaaatacggta
gaaattgccaaacgctgcaacttaaagctgaccttgggcgaaaatttcctgcctgatttt
ccggtgccagaaggcatgaatctgggtgagtttatggccgaagagtccatgaaaggcctg
gaagagcgtttgcagcattatcccgcagttggaaaaggctcagatgaagaaaaccgacgg
gtttactatgaccgtctggattttgagttaaaaatgataacccagatgggttttcccggt
tattttatgattgttgccgactttattcagtgggcaaaaaaaaatcttattccggtcggc
cccggacggggctcaggtgccggttcgttggttgcttatgcgttgaagattaccgatctt
gatccgattgaattcgatctactgtttgaacgatttttaaatcccgagcgggtttccatg
cctgactttgacgtagatttttgcatggatcgccgcgatgaagtgattgattatgttgcc
cgtcattatggcagggatcatgtcgcacagatcattacctacggttcgatggcagccaaa
gcggttattcgtgatgtaggacgagtcttgggttttgcttacggctttgtcgatcgtctg
gccaaactgattccgtttgaaatcggcatgaccctaaccaaagcgttaaaagacagtcct
gagcttaaacagctttatgacactacagaagaagtcagaaccctgattgacatggcgctg
tctttggaagggacggtaagaaatgccggcaaacatgccggtggtgtggtgatatcaccc
accaagctgaccaattttacgccattgtattgcgaccaggatggtaataatctcgttacc
cagtttgacaaggatgatgtggaagccgtcggtctggtcaaatttgactttttaggtcta
cgcacactaaccattattgattgggcattacaagatatcaatgccaaacataaattactc
ggtaaaccattggttgatataaccactattcccagagatgatccagcttcctataaatta
ttaactaacgcccaaaccaccgccgtatttcagttggaatcacgtggcatgaaagaactg
attaaaaagctaaagcccgactgctttgacgatattatcgcactggtggcgctgtttcgt
ccggggcctttggagtcgggcatggttgatgattacattaatgtcaaacatggggcaaaa
gccgagtatgcacatcccttgttggtacctattttaaagcctaccaacggcgttattttg
tatcaggaacaagtgatgcaaattgcccgtgaattggccctttatacgctgggcggcgca
gatatgctgcgtcgggccatgggtaaaaagaaagccgaagaaatggcaaaagagcgtgaa
aaatttactaccggtgcggtcgaaaatcaggtcgatgaaccgatagccacatatgttttc
gatttaatggaaaagtttgccggctatggttttaacaaatcccattcggcggcttacgct
ctggttgcttatcaaaccgcctggttaaaagtgcattttcctgccgagtttatggctgca
gtattgtctgccgatatggataatactgacaaggtcgtggtattgatagaagaatgtcga
caaatgaaactggctattcttccgcccaccctcaacgtatcgacctatcgatttgccgtc
aatgatgacaatcatattgtttatggtttgggtgcaatcaagggtgtggggcaagcagcc
attgaagacatgcttatcgaacgtaataataacgggccgttttcaggcttgtatgattta
tgtaaacgggttgatttacgaaaatttaatcggagggtactggatgccttaatccgcgcc
ggtgcttttgatgaatttgatgacaatagagcccggcacttggcagaattgcctaccgcc
ttaagagccgccgagcaacacggaaaaatggcacaaaccggacaaaatgacctgttctcg
ctacccggttctgattctgaaacggaaaataatgataatactgtcgataataccgatgct
tatgctgccatcattcaaccctggtcggacaaggaacgtttggcggcagaaaaacaaacc
ttgggcctgtttttaacagggcatccgatagaccaatatgaatcggaattaaaaaacttt
acccatggaaaaataggcacgctgcaagtctcacgcggcaatgtggaagcaaggattgcc
ggtctagtggtagaagtacgtacccgtcaaaccaaacaaggaaaaaccatgggctttgct
accctggatgataaaacgggtcgacttgaatgtgctgtatttggtgaggtttacgagaaa
tatcgggggatttttacgcgcgataacttgctaattgccgagggatctttaggtattgat
aatttttccggtggcctgcgcttaatggtagaaaaactatacgatatggatcaggcaaga
gagagtttttcccgaggcattaaactaacctggaatgctcccaaaaacaaaccggaagaa
gagcattatattgacagactgtctgaagcactcgccccgtttaagggcggtagctgtcct
gtcagcatcaactacacgtcacagcatgctcaagccactgttcaactgggtgatgaatgg
cgaatccatccaaccgatgaactgatttcgcgcttaaaatccttgtttggatcaacagcc
atagaagtaagatatcgataa
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