Methylobacter sp. S3L5C: KKZ03_21560
Help
Entry
KKZ03_21560 CDS
T08037
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
mesl
Methylobacter sp. S3L5C
Pathway
mesl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mesl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KKZ03_21560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesl03021
]
KKZ03_21560
Transcription machinery [BR:
mesl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KKZ03_21560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
HisK_N
Motif
Other DBs
NCBI-ProteinID:
UOA08737
LinkDB
All DBs
Position
complement(4788056..4789435)
Genome browser
AA seq
459 aa
AA seq
DB search
MAYLNTQLSKQELGVVAENIPIENELAESNITAPTDFVENSNLKIARKLIDEKSRLINVL
CQFPVTALWLLNEYEQKSYATESDDEAASASELTTTLINIKKYFHCLSGKTLLDATYIAD
KKNLYTALQSFPFSFNDLTKLVDTIVYAHKFRGLCYQPTHSLDKNSDLILKRLEGLSRRS
TNKSSKWSQILLAYDGQFLFLSSSDMHKYFSEVVISEHHWLKLRQQLATANSRLVLFIAN
QYKGCFLNFDDLVQEGQIGLLKAVDRFNYRLGFQFSTYAGYWIRQSISRSLSRCERVVRV
PCGQVANINKVFRTKDQLTTKQGKEPSIKELAECAKLSNDEINSILSISQTAMSLEGFED
DEENSFAPIDFLEQQVFTPSFMTIAKSDLEDLITKAIKVLNPREAKVICCHFGVNSDNEM
TLQEIGAELNLTRERVRQIQVMALDKIKRSFGEQLISFL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcttatttaaatacacagttgtcaaagcaagaattaggcgtggttgctgaaaacatt
cctattgaaaatgaactagctgaaagtaatattactgccccgacagactttgtcgagaat
agtaatttgaaaatagcgcgtaaattaatagatgaaaaatccagactaataaacgtgctg
tgtcaatttccggtaacggctttatggttgctcaacgaatatgaacaaaaatcttatgcg
actgaatcagatgatgaagcagcttcagcgtcagaattaacaactacgctaataaatata
aaaaagtactttcactgtctgtctggcaaaactttattagatgcaacttatatcgctgac
aaaaaaaatctctatacagctttgcaatcatttcctttctcttttaatgatttgacaaaa
ctggtagacactattgtttatgcccataaatttagaggcctttgttatcaacctacgcat
agtctcgacaaaaattctgatttaattcttaagcgcctggaaggtttaagtcgacgtagc
actaataaatcttctaaatggtcacaaatattattggcttatgatgggcagtttttattt
ttgtccagcagtgacatgcataaatatttttccgaggtggttatttctgaacaccattgg
ttaaaattgaggcaacaactcgctacagcaaattccagattagttttatttattgccaat
caatataaaggctgttttttaaattttgatgatcttgttcaggaaggtcagattggtttg
ctaaaggcggttgacaggtttaactaccggttgggttttcaattctcaacttatgccggt
tactggatcagacagtctatatcccggtctttgtctcgctgcgagagagttgtgcgtgtg
ccttgcgggcaagtggctaacattaataaagtttttcgtaccaaggaccaactgactacg
aaacaaggcaaagaacccagtattaaagaattggctgaatgtgcaaaattatcgaatgat
gaaattaattctattttatctatttcacaaacagctatgtcgcttgaaggctttgaagat
gacgaagaaaattcttttgcaccaattgattttttggagcaacaggtttttacgccgtcc
tttatgacgatagcgaaaagtgatcttgaggatttaattactaaagcaataaaagtgctt
aatccaagagaagctaaagtcatttgttgtcattttggtgttaatagcgataatgaaatg
actttacaggaaattggcgcagagcttaatctaaccagagagcgtgtcagacaaattcag
gtaatggcgcttgataaaataaaacgtagttttggcgagcaattaataagttttttataa
DBGET
integrated database retrieval system
