Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2: EJ066_02695
Help
Entry
EJ066_02695 CDS
T05904
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
mesm
Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2
Pathway
mesm02020
Two-component system
mesm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mesm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EJ066_02695 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EJ066_02695 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesm03021
]
EJ066_02695 (rpoN)
Transcription machinery [BR:
mesm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EJ066_02695 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_3
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
AZN96288
UniProt:
A0A3Q8XST3
LinkDB
All DBs
Position
complement(544769..546295)
Genome browser
AA seq
508 aa
AA seq
DB search
MALAAKLQLRQSQSLVMTPQLMQSIRLLQFTHIELERFIDDEIERNPLLERAEPQDDAAS
DQAQKIDAAPDEAANGDWFETETAWSAEAISEKLDASLENLFPDDPGTAERLGPDLTAQW
KSASGSGSMSSSDGFDVGDMAATAITLREHVGEQVALAFTDPAARLIAGELADGLDEAGY
MRADIEEIAARLGTDRAAVTNVLAVCQAFEPAGIFARDLAECLSLQLAVRDRLDPAMKAL
IANLELLARRDFQTLKRICGVDEEDLLDMLAEIRALDPRPGMAFSGGTSDAIIADVEVRA
ANDGSWVVELNAETLPRVLVDHIYFAQVSPHAKNQTEKDFLAECLQNANWLTRSLDQRAK
TILKVASEIVRQQDAFLVHGVRHLKPLNLRMVADAIGMHESTVSRVTANKYMLTPRGVFE
LRYFFTASIASSGGGDAHSSEAVRDRIKQLIDEEKPVDVLSDDAIVDMLRENGVDIARRT
VAKYRESMNIPSSVQRRREKRALASAGR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcattggcggcaaaactacagctacgacagtcccaatcgctggtgatgacacctcag
ctgatgcagtcgatccggctgctgcagttcacccatatcgagctggaacgcttcatcgac
gacgagatcgagcgcaatcctctgctcgaacgcgccgagccgcaggacgatgctgccagc
gaccaggcgcagaagatcgacgccgcgccggacgaggccgccaatggcgactggttcgaa
acggaaacggcgtggagcgccgaggcgatctcggaaaagctcgatgcttcgctggaaaat
ctgttccccgacgatcccggcacagcagagcggctcggtcccgacctgacggctcagtgg
aaatcggcctccggcagcggttccatgtcctcgtccgacggcttcgacgtcggagacatg
gcggctaccgccatcacgctgcgcgagcatgtcggcgaacaggtcgcgcttgcctttacc
gacccggcggcacgcctgatcgccggcgaacttgccgatggcctcgacgaggctggctat
atgcgcgccgacatcgaggaaatcgccgcccgtctcggcaccgacagagcggcggtgacg
aatgtgctcgcggtctgccaggcattcgagccagccggcatctttgcccgcgacctcgcc
gaatgtctgtcgctgcagcttgccgtccgcgaccgcctcgatccggcaatgaaggctttg
atcgccaatctcgagctcctggcgcggcgcgacttccagaccctgaaacggatttgcggg
gtcgacgaggaggatttgctcgacatgctggccgagatacgcgcgctcgatccgcgcccg
gggatggcgttttcgggcggcaccagcgacgccatcatcgccgatgtcgaagtgcgggcg
gccaatgacgggagctgggtggtcgaactcaacgccgaaacgctgccgcgcgtgctggtc
gatcatatctatttcgcccaggtttcaccgcatgcgaagaaccagacggaaaaggatttc
ctggcggaatgcctgcagaacgccaactggctgactcgcagcctcgaccagcgggcgaag
accatcctcaaggtcgcctcggaaatcgtgcgccagcaggatgctttcctcgtccatggc
gtgcgtcacctgaagccgctcaacctgcgcatggtggccgacgccatcggcatgcacgaa
tcgaccgtcagccgggtcaccgcgaacaaatacatgctgacgccacgcggcgtgttcgaa
ctgcgctatttcttcaccgcctcgatcgcttcgtcgggtggcggcgacgcgcattcgtcg
gaagccgtgcgcgatcgcatcaagcagttgatcgacgaggagaagcctgtcgacgtgctt
tccgacgacgcgattgtggacatgttgcgggaaaacggcgtcgatatcgccaggcgtact
gtcgccaagtaccgggagagcatgaatattccgtcgtcggtgcagcgacggcgtgaaaaa
cgcgctttggccagcgccgggcgttga
DBGET
integrated database retrieval system
