Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2: EJ066_02860
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Entry
EJ066_02860 CDS
T05904
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mesm
Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2
Pathway
mesm03030
DNA replication
mesm03410
Base excision repair
mesm03420
Nucleotide excision repair
mesm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mesm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EJ066_02860 (polA)
03410 Base excision repair
EJ066_02860 (polA)
03420 Nucleotide excision repair
EJ066_02860 (polA)
03440 Homologous recombination
EJ066_02860 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesm03032
]
EJ066_02860 (polA)
03400 DNA repair and recombination proteins [BR:
mesm03400
]
EJ066_02860 (polA)
Enzymes [BR:
mesm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EJ066_02860 (polA)
DNA replication proteins [BR:
mesm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EJ066_02860 (polA)
DNA repair and recombination proteins [BR:
mesm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EJ066_02860 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EJ066_02860 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Taq-exonuc
HHH_5
HHH
IMS_HHH
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AZN96319
LinkDB
All DBs
Position
575778..578744
Genome browser
AA seq
988 aa
AA seq
DB search
MKKGDHLFLIDGSGYIFRAYHALPPLTRKSDGLPVSAVLGFCNMVWKLTQDARNTDVGVV
PTHFAVIFDYSSKTFRNDLYPEYKANRSAPPEDLIPQFGLIRQATKAFNLPCIEMEGFEA
DDLIATYCRLAREAGGDTTIISSDKDLMQLVGATVGMYDPMKDRQIGIPEVVEKWGVTPE
KMIDLQALTGDSVDNVPGVPGIGPKTAAQLLEQFGDLDGLLTRAGEIKQEKRRESIIANA
DKARISRELVTLKNDVPVIEGLDDFTLHEPDGPKLIGFLKTMEFSSLTRRVAEATGTEPA
DVQAVAVTIERADTAHGPDVGFGMPAAAESAAGAVTDEAGRAAPTAAKAEPREGDTPSLL
SALRFEDATARKIDTSAYVSIRDTATLKAWIAEAMETGIVAFDTETTSTDPMQAELIGFS
MATAPGRAAYVPLAHKSGNGDLLGGGVVENQIPIREALGVLKPLLEDRSVLKIVQELKYD
LVVMSRHGIDVAPFDDTMLISYVLDAGTSGGHGMAALSEKWLGHSTIPLKELAGSGKSFV
GFDQVDIDKATAYAAEHADVTLRLWRVLKPRLAAKGLVSVYERLERPLVPVLARMEQRGI
SVDRQILSRLSGELAQGAARLEDEIYQLVGERINIGSPKQLGDILFGRMGLPGGSKTKTG
QWSTSAQLLEDLAAEGHELPRKIVDWRQLTKLKSTYTDALPGFVHPDTKRVHTSYALAAT
TTGRLSSSDPNLQNIPVRTVEGRKIRTAFIADNGNKLVSADYSQIELRVLAHVAEIPQLT
QAFADGADIHAITASEMFNVPVEGMPAEIRRRAKAINFGIIYGISAFGLANQLSIPREEA
GAYIKKYFERFPGIRDYIDATKAYAREYGYVETIFGRRIHYPEIRSSNPSVRAFNERASI
NARLQGTAADIIRRAMVRMDDALEKAKLSARMLLQVHDELVFETAEAEVEATIPVVRHVM
ENAAMPAVSMSVPLHVDARAANNWEEAH
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatctcttccttatcgacggctccggctacatcttccgcgcctat
cacgcgctgccgccactgacccgtaaatccgacggcctgccggtcagtgccgtgctcggc
ttctgcaacatggtttggaagctgacgcaggacgcccgcaacaccgatgtcggcgtggtg
ccgacgcatttcgccgtgatcttcgactattcgtcgaaaaccttccgcaacgatctctac
cccgaatacaaggccaaccgctcggcaccgccggaggatttgatcccgcaattcggcctg
atccgccaggcgaccaaggccttcaacctgccctgcatcgagatggaagggttcgaggcc
gacgacctgatcgccacctattgccggcttgcccgcgaagccggcggcgacaccaccatc
atctcctccgacaaggatctgatgcagttggtcggcgcaaccgtcggcatgtacgacccg
atgaaggaccgccagatcggcattcccgaagtcgtcgagaaatggggcgtgacgccggaa
aaaatgatcgacctgcaggcgctgaccggcgattcggtcgacaacgtgccgggcgtgccc
ggcatcggcccgaagacggcggcgcaactgctcgaacagttcggcgacctcgatggactg
cttacacgcgccggcgaaatcaagcaggagaagcgccgcgaatcgatcatcgccaatgcc
gacaaggcgcgcatttcgcgtgaactggtgacgctgaagaacgacgtgccggtgatcgag
gggctcgacgatttcacgttgcacgagcccgacgggccaaagctgatcggcttcctcaag
accatggagttctcgtcgctgacccgccgcgtggcggaagcgaccggaacggagccggct
gatgtccaggccgtcgccgttacaatcgagcgcgccgacaccgcgcatggtcccgatgtg
gggtttggaatgccggcagccgccgaaagcgcggcgggcgccgtgacagacgaagccggg
cgagcggcgccgaccgccgccaaggcagagcccagggaaggcgataccccttcccttctg
tcggcgcttcgcttcgaggacgccaccgccaggaaaatcgacaccagcgcctacgtctcc
atccgcgacacagccacgctgaaggcctggatcgccgaggcgatggagaccggcatcgtc
gccttcgacaccgagaccacctcgaccgatccgatgcaggccgagctgatcggcttttcc
atggccaccgcgcccgggcgcgccgcctatgtgccgctcgctcataaaagcggcaacggc
gacctgctcggaggcggtgtggtcgaaaaccagattccgatccgtgaggcgcttggcgtc
ctgaagccgttgctggaggacaggtctgttctcaagatcgtgcaggagctgaaatacgac
ctcgtcgtcatgagccgccacggcatcgatgtcgcccccttcgacgacaccatgctgatt
tcctacgtgctcgacgccggcacatccggcggccacggcatggcggctctgtcggagaag
tggctcggccattcgaccattcccctcaaggaactggccggctcgggaaaaagcttcgtc
ggcttcgatcaggtcgatatcgacaaggcaacggcctatgccgccgagcacgccgatgtg
acgctcaggctctggcgggtgctgaagccaagacttgccgccaagggcctcgtctcggtc
tacgagcgactggaacggccgctcgtgccggtgctggcaaggatggaacagcgcggcatc
tcggttgaccggcagatcctgtcgcggctctccggcgagctggcacagggcgccgcgcgg
ctggaggatgaaatctaccagctcgtcggcgagcgcatcaacatcggctcgccaaaacag
ctcggcgacatcctgttcggcaggatgggcctgcccggcggctccaaaaccaagaccggc
cagtggtcgacttcagcgcaacttctcgaagaccttgccgcggaaggccacgagctgccg
cgcaagatcgtcgactggcgtcagctgaccaagttgaaatcgacctataccgatgccctg
cccggtttcgtccatcccgatacgaagcgcgtccacacctcatacgccctcgccgcgacc
acaacgggacggctgtcgtcctccgatcccaatttgcagaacattccggtgcgcaccgtc
gaggggcgaaagatcaggacggccttcatcgccgacaacggcaataagctggtttccgcc
gactacagccagatcgagctgcgcgtgcttgcccatgtcgccgagatcccgcagttgacg
caggcctttgccgacggtgccgacatccatgccatcaccgcgtcggaaatgttcaacgtg
ccggtcgaaggcatgccggcggagatacgccgccgcgccaaggcgatcaatttcggcatc
atctacggcatttccgcctttggcctcgccaaccagctgtcgatcccgcgcgaggaggcc
ggtgcctacatcaagaaatatttcgaacgcttcccgggcatccgcgactatatcgacgcg
accaaagcctatgcccgcgaatacggctatgtcgaaaccatcttcggccgccgcatccac
tatccggagatacggtcgtcgaacccttcggtccgcgccttcaacgagcgcgcctcgatc
aacgcccgcctgcagggcaccgcggccgacatcatccgccgcgccatggtgcgcatggac
gatgcgctggaaaaggcgaagctttccgcccgcatgctgctgcaagtgcatgacgagctg
gtcttcgagaccgccgaagcggaggtcgaggcgacaatccccgtcgtgcgccacgtcatg
gagaacgccgcgatgccggcggtatcgatgtcggtgccgctgcatgtcgatgcgcgggcg
gccaacaactgggaagaggcgcattag
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