KEGG   Mesorhizobium sp. NBSH29: GA830_04455
Entry
GA830_04455       CDS       T11812                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
mesn  Mesorhizobium sp. NBSH29
Pathway
mesn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mesn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GA830_04455 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mesn03021]
    GA830_04455 (rho)
   03019 Messenger RNA biogenesis [BR:mesn03019]
    GA830_04455 (rho)
Transcription machinery [BR:mesn03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     GA830_04455 (rho)
Messenger RNA biogenesis [BR:mesn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     GA830_04455 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_22 AAA_25 S1CSD-TOTE-2 NACHT DUF6360 Fungal_virus_P2_C AAA
Other DBs
NCBI-ProteinID: QPC88525
LinkDB
Position
complement(907800..909065)
AA seq 421 aa
MQEMKLQELKSKKPPELIAYAETLEVENASVLRKQELMFAILKQLAAQDVEIIGEGVVEV
LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVN
TINFEDPEKIRHKIHFDNLTPLYPDERLRMEVENPTTKDLSARVIDLVAPLGKGQRGLIV
APPRTGKTVLLQNIAHSITSNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAT
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPS
MDILKSGTRKEDLLIARQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKANTDFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaggaaatgaaactccaagagctcaagagcaaaaaaccgccagagctcatcgcttat
gccgaaacgcttgaggttgagaacgccagcgtgctgcgcaagcaggaactgatgttcgcg
attctaaagcagttggctgcacaggatgttgagatcattggcgaaggcgtcgtggaagtg
ctgcaggacggctttggtttccttcgctctgcgaatgccaactacttgccaggtccggat
gacatttatatctcgccatcccaaattaggcgcttctcgttaaaaaccggcgatacagtc
gaggggccgatccgaggtcctaaagaaggagagcgctattttgcgctcctcaaagtcaat
acgatcaactttgaagatccggagaaaatccgccacaagatccacttcgacaatctgacg
ccgctctaccccgatgagcgactgcgtatggaagttgaaaaccccaccaccaaggatcta
tcagcccgtgtgattgatctggttgcgccgcttggtaagggccaacgcggcctgatcgta
gcgccgccacgcaccggtaagaccgtgctgttgcaaaacatcgcgcattcgatcacctcg
aatcaccctgagtgctacctgattgttctactgatcgacgaacgtccggaagaagtcacc
gacatgcagcggtcggtgaagggcgaagtcgtttcctcgacctttgatgagccggcaaca
cgtcatgtgcaggtcgccgagatggtcatcgagaaggccaagcggctggttgagcatggg
cgcgacgtcgtcatcctgcttgattcgatcacgcggcttggtcgtgcctacaatacggtt
gtaccgtcatcaggcaaggtgttgaccggtggtgtcgatgcaaatgcgctgcagcgaccg
aaacgcttcttcggtgccgctcgtaatatagaggaaggtggttcactgactatcatcgcg
accgcgctgattgatacaggaagccgtatggatgaagtgatttttgaagagtttaagggc
accggtaactctgaaatcgttcttgaccgcaaggtggcagacaagcgtattttcccgtcg
atggatattctgaagtctggcacgcgcaaggaagaccttcttatcgcacgtcaggatttg
cagaagattttcgttctgcgtcgtattctagcacctatgggcacaaccgatgctattgag
ttccttatcgacaagctcaagcaaacgaaggccaacacggacttcttcgattcgatgaac
acctga

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