Aquibium oceanicum: BSQ44_02290
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Entry
BSQ44_02290 CDS
T04603
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
meso
Aquibium oceanicum
Brite
KEGG Orthology (KO) [BR:
meso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meso03032
]
BSQ44_02290
03036 Chromosome and associated proteins [BR:
meso03036
]
BSQ44_02290
03400 DNA repair and recombination proteins [BR:
meso03400
]
BSQ44_02290
DNA replication proteins [BR:
meso03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BSQ44_02290
Chromosome and associated proteins [BR:
meso03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BSQ44_02290
DNA repair and recombination proteins [BR:
meso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BSQ44_02290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
APH70343
UniProt:
A0A1L3SLR7
LinkDB
All DBs
Position
446161..446442
Genome browser
AA seq
93 aa
AA seq
DB search
MIKSELVQSIANRNPHLFLRDVENIVNAIFEEITEALAEGNRVELRGFGAFSVKNRPART
GRNPRTGESVEVEEKWIPFFKTGKELRERLNMK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgataaaatcggagctggtccagagcatcgccaaccgcaatccgcatcttttcctgcgt
gacgtggaaaacatcgtcaacgcgatcttcgaggagatcacggaagcactcgcggagggc
aaccgggtggaactgcgcggcttcggcgccttctcggtcaagaaccgtccggccaggacc
gggcgcaacccgaggaccggcgagtccgttgaggtcgaggaaaagtggatcccctttttc
aagacggggaaagaacttcgcgaacggctcaacatgaagtag
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integrated database retrieval system
