Aquibium oceanicum: BSQ44_02840
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Entry
BSQ44_02840 CDS
T04603
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
meso
Aquibium oceanicum
Brite
KEGG Orthology (KO) [BR:
meso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meso03032
]
BSQ44_02840
03400 DNA repair and recombination proteins [BR:
meso03400
]
BSQ44_02840
Enzymes [BR:
meso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BSQ44_02840
DNA replication proteins [BR:
meso03032
]
Prokaryotic type
DNA Topoisomerases
BSQ44_02840
DNA repair and recombination proteins [BR:
meso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BSQ44_02840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
APH70434
UniProt:
A0A1L3SM09
LinkDB
All DBs
Position
562418..563479
Genome browser
AA seq
353 aa
AA seq
DB search
MDTIPTASAARELSAARADLAYVSDMEPGIRRRRVGKGFTFFTPEGQRLAVPETIARIKA
LAIPPAWTDVWISPDPTGHIQATGRDQKGRKQYRYHPGWTACRDEAKFSSLVDFAGALPR
IRDRVDQDLRMRGTPRERVLASIVWLLDNTLIRIGNDAYSRENKSFGLTTLRRKHVRIEG
QRIRFSFVGKSGQEWKLQLTDRRIARIVGAIEELPGQHLFQYLDEEGTRRPVHSHDVNRY
IHETAGPDFSSKHFRTWSATIFAADMFAQKEYPSTKRELARTTNEVIDKVAARLRNTRAV
CRRCYIHPIVIESWEQGKLSEEIAEIRRHTRKPLQGLDEDESTVLRWLRARHQ
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggacaccatacccaccgccagcgccgcgcgcgaattgtcggccgcgcgggcggacctc
gcctatgtcagcgacatggagccgggcatacgccgccggcgcgtcggcaagggctttacc
ttcttcacgcctgaggggcagcgtctggcggtgccggagaccatcgctcgcataaaggcg
ctcgccataccgccggcctggactgacgtgtggatctcgcccgatccgaccggccacatc
caggcgaccggccgcgaccagaagggacgcaagcagtaccgctatcatccgggatggacg
gcctgccgcgacgaggcgaagttctcctcgctggtcgatttcgccggcgccctgccgcgc
atccgcgaccgggtcgaccaggacctgcgcatgcggggcaccccgcgcgagcgcgttctc
gcctccatcgtctggctgctcgacaacacgctgatccgcatcggcaacgatgcctattcg
cgcgaaaacaagagcttcggcctgacgaccctgcgccgcaagcacgtgcgcatcgagggc
cagcgcatccgcttttccttcgtcggcaagtctgggcaggaatggaagctgcagcttact
gatcggcgcatcgcgcgcatcgtcggcgccatcgaggaactgccgggccagcacctgttc
cagtacctcgacgaggagggcacgcggcggcccgtccactcgcacgacgtcaaccggtac
attcacgagacggcagggccggacttcagctccaagcacttccgcacctggtcggccacc
atcttcgccgccgacatgttcgcgcagaaggagtacccgtcgaccaagcgcgaactggcc
cgcaccaccaacgaggtgatcgacaaggtcgcggcgcggctgcgcaacacccgcgccgtc
tgccgccggtgttacatccacccgatcgtcatcgagagctgggaacagggaaagctgtct
gaagagattgccgagatccgtcgccacacccgaaagcccctccagggcctcgacgaggac
gaatcgaccgtcctgcgctggctgcgcgctcgccaccaatag
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