Aquibium oceanicum: BSQ44_03075
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Entry
BSQ44_03075 CDS
T04603
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
meso
Aquibium oceanicum
Brite
KEGG Orthology (KO) [BR:
meso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meso03021
]
BSQ44_03075
03009 Ribosome biogenesis [BR:
meso03009
]
BSQ44_03075
Transcription machinery [BR:
meso03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
BSQ44_03075
Ribosome biogenesis [BR:
meso03009
]
Prokaryotic type
rRNA transcription factors
BSQ44_03075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
KH_1
DUF6280
E2F_CC-MB
Ribosomal_S17e
Motif
Other DBs
NCBI-ProteinID:
APH70478
UniProt:
A0A1L3SM46
LinkDB
All DBs
Position
complement(611790..613394)
Genome browser
AA seq
534 aa
AA seq
DB search
MAVSANRLELLQIADAVAREKSIDKGIVIAAMADAIQKAARSRYGQETNIRADINPTTGE
MKLQRLMEVVEEVEEFGRQISLRDARDRNPDAQVGDFIAEQLPPMDFGRIAAQSAKQVIV
QKVREAERDRQYDEYKDRIGEIINGTVKRVEYGNVIVDLGRGEAIIRRDELIPRENYKYG
DRVRAYVYDVRREQRGPQIFLSRTHPQFMAKLFQMEVPEIYDGIIEIKSVARDPGSRAKI
AVISRDSSIDPVGACVGMRGSRVQAVVGELQGEKIDIIPWSHDAASFIVNALQPAEVAKV
VLDEDAERIEVVVPDDQLSLAIGRRGQNVRLASQLTGWDIDILTEQEESERRQKEFVERS
NLFMDALNVDEMVGQVLASEGFTSVEEVAYVDADEIASIDGFDEDTASEIQARAREYLER
IEAEHDAKRRELGVEDELREVPGVTTAMMVTLGEDGVKTVEDFAGYAVDDIVGWKERKDG
ETKMFPGVLSEHGVSRADAEQMVLAARLKAGWITEDDLAGDADEAELEEQPAEA
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagtgcaaaccggctggagcttctgcagatcgcggacgccgtggcccgcgag
aaatcgatcgacaagggcatcgtcatcgcggcgatggccgacgcgatccagaaggcggcg
cgctcgcgctacggtcaggagaccaacatccgcgccgacatcaacccgaccacgggcgag
atgaagctgcagcgcctgatggaggtggtcgaggaggtcgaggagttcggccggcagatc
tcgctgcgcgacgcgcgcgaccgcaacccggacgcacaggtcggcgacttcatcgccgag
cagctgccgccgatggatttcggccgcatcgcggcgcagtcggccaagcaggtgatcgtg
cagaaggtgcgcgaggccgagcgcgaccggcagtacgacgagtacaaggaccgcatcggc
gagatcatcaacggcacggtcaagcgcgtcgaatacggcaacgtgatcgtcgatctcggc
cgcggcgaggcgatcatccgccgcgacgagctgatcccgcgcgagaactacaagtatggc
gaccgcgtgcgcgcctatgtctacgacgtgcgccgcgagcagcgcggtccgcagatcttt
ctctcgcgcacgcatccgcagttcatggccaagctgttccagatggaagtgccggaaatt
tacgacggcatcatcgagatcaagtcggtcgcccgcgacccgggttcgcgcgccaagatc
gcggtgatctcgcgcgactcgtcgatcgatccggtcggcgcgtgcgtgggcatgcgcggc
agccgcgtgcaggcggttgtcggcgaattgcagggcgagaagattgacatcatcccgtgg
tcgcacgacgcggcctccttcatcgtcaacgcgctgcagccggccgaagtcgccaaggtg
gtgctcgacgaggatgccgaacgtattgaagtcgtcgttcccgatgaccaactgtcactt
gcgatcggccggcgcggacagaacgtgcgcctggcctcgcagctgacgggctgggacatc
gacatcctcaccgagcaggaggagagcgagcgccgtcagaaggagttcgtggaacgctcc
aacctgttcatggatgccctgaacgtcgacgagatggtcggtcaggtcctggcgtccgaa
ggtttcacctccgtggaggaagtcgcctacgtcgacgccgacgagatcgcgtcgatcgac
gggttcgacgaggacacggcgtcggagatccaggcacgcgcgcgggaatatctcgagcgc
atcgaggccgagcacgacgccaagcggcgcgagctgggcgtcgaggacgagctgcgtgag
gtgcccggcgtgaccaccgccatgatggtgacgctcggcgaagacggcgtgaagacggtc
gaggacttcgccggctacgcggtcgacgacatcgtcggctggaaggagcgcaaggacggc
gagaccaagatgttccccggcgtgctttcggagcacggggtgagccgcgccgacgccgag
cagatggtgctcgccgctcgcctgaaggcgggctggatcaccgaggacgacctcgcgggg
gatgccgacgaggccgaactggaagaacagccggccgaagcctga
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