Aquibium oceanicum: BSQ44_06615
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Entry
BSQ44_06615 CDS
T04603
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
meso
Aquibium oceanicum
Brite
KEGG Orthology (KO) [BR:
meso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meso03016
]
BSQ44_06615
Enzymes [BR:
meso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BSQ44_06615
Transfer RNA biogenesis [BR:
meso03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BSQ44_06615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
APH71077
UniProt:
A0A1L3SNS9
LinkDB
All DBs
Position
complement(1325565..1326182)
Genome browser
AA seq
205 aa
AA seq
DB search
MSIRFHRNDLPDLTHYDVEAVAIDTETLGLKPHRDRLCVVQMSPGDGTADVIQIDRGQTA
APNLVSLLGNERITKIFHFGRFDLAVLFHAFGVMPSPVFCTKIASRLTRTYTDRHGLKDV
CQEFLGITLSKQQQSSDWAAETLSPEQLEYAASDVLHLHRLRDALLGRLSRDGRMAEAEA
CFEFLPTRSKLDLMGWDEEDIFAHS
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
ttgagcatccgcttccaccggaacgacctgccggacctcacgcactacgacgtcgaggcg
gtcgccatcgataccgagacgctggggctgaagccgcaccgcgaccggctctgcgtggtg
cagatgtcgcccggcgacggtacggccgacgtgatccagatcgaccgcggccagacggcg
gcgcccaatctcgtttcgctgctgggcaacgagcggatcaccaagatcttccacttcggg
cgcttcgacctcgcggtgctgtttcacgccttcggggtgatgccctcgccggtcttctgc
accaagatcgcctcgcggctcacccgcacctacaccgaccggcacggactgaaggacgtc
tgccaggaattcctaggcatcacgctgtcgaagcagcagcagtcgtccgactgggcggcc
gaaacgctgtcgccggagcagttggagtatgccgcctccgacgtgctccacttgcatcgg
ctgcgcgatgcccttcttggccggctgtcgcgcgacggtcgcatggcggaggccgaggcc
tgtttcgagttcctgccgacccggtcgaagctcgacctgatgggctgggacgaagaagac
attttcgcgcatagctga
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