Aquibium oceanicum: BSQ44_09005
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Entry
BSQ44_09005 CDS
T04603
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
meso
Aquibium oceanicum
Brite
KEGG Orthology (KO) [BR:
meso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meso03400
]
BSQ44_09005
DNA repair and recombination proteins [BR:
meso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
BSQ44_09005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
AAA_22
DUF87
FtsK_SpoIIIE
AAA_30
ResIII
AAA_16
T2SSE
AAA_10
TraG-D_C
Hydrolase
TrwB_AAD_bind
DUF5852
nSTAND3
AAA_7
AAA_18
AAA_19
DUF4192
CbiA
AAA_28
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
APH71493
UniProt:
A0A1L3SPZ9
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All DBs
Position
1815124..1816746
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AA seq
540 aa
AA seq
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MAEDESLFLGASRKPDDSYQRAETLLLRYANRHGLVTGATGTGKTVTLQILAESFSNAGV
PVFCADIKGDLSGIAAIGEAKDFLVKRAGQVKLDPYEFQEFPVIFWDLFGEKGHPIRATI
SEMGPLLLSRLMNLSDAQEGVMNIAFRIADEEGLLLLDLKDLQAMLAHIADRADEIGRKY
GNVSKASVGAIQRSLLVLEQQGGEHFFGEPALRIEDLMRTTRDGRGAINVLAADKLMMNP
RLYATFLLWLMSELFEALPEIGDPDRPRLVFFFDEAHLLFDEAPKILIDRVEQVVRLIRS
KGVGVYFVTQNPLDVPETVLAQLGNRIQHALRAYTPREQKAVRASAETFRPNPDFYCADA
ITQLGVGEALVSTLEAKGVPSMVQRTLIRPPSSRLGPLTEPERQKIQAVSPVAGQYDKPI
DRESAFEMLEKKAAEAARAEEEARENEDAAPADAGRGRTRWTLPDFDGGGEKRDRDDDDD
DLEEDYRRRRSSRTRSAPRKRTSNRQTVAEAAIKSVVRSVGSSLGRALVRGVLGSLKRGG
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagacgagagcctgtttctgggggcgagcaggaagccggacgactcctatcag
cgtgcggaaacgttgctcctgcgctatgcgaaccggcacgggctcgtgaccggcgccacc
ggcaccggcaagacggtgaccctgcagatcctggccgagagcttctccaatgccggggtt
cccgtgttctgcgccgacatcaagggcgatctctcgggcatcgcggccatcggcgaggca
aaggatttcctggtcaagcgggcagggcaggtgaagctcgacccctacgagttccaggag
tttccggtgatcttctgggacctcttcggcgagaaggggcatccgatccgggccacgatt
tccgaaatgggaccgcttcttctgtcgcggctgatgaacctttcggatgcgcaggagggc
gtgatgaacatcgccttccgcatcgcggacgaggaggggttgctgctcctcgacctgaag
gaccttcaggcgatgctggcccatatcgccgatcgcgccgacgagatcggccgcaagtac
ggcaacgtctcgaaggcatcggtcggcgcaatccagcgttcgctgctggtgctggagcag
cagggcggggagcatttcttcggcgaaccggcgctgcgcatcgaggacctgatgcgaacg
acccgcgacgggcgcggcgcgatcaatgtgctcgccgccgacaagctcatgatgaacccg
cggctctatgcgacctttcttctctggctgatgtcggaactcttcgaggcgcttcccgag
atcggcgatcccgaccgtccgcggctggtgttcttcttcgacgaggcgcaccttctgttc
gatgaggcgccgaagatcctgatcgaccgggtggagcaggtggtgcgcctcatccgctca
aagggagtgggcgtctatttcgtgacgcagaacccgctcgacgtgccggagacggtgctc
gcgcagctcggcaaccgcatccagcacgcgctgcgggcctatacgccgcgcgaacagaag
gcggtgagggcttcggccgaaaccttccggcctaaccccgatttctactgcgccgacgcg
atcacccagctcggcgtcggggaagcgctggtttcgacgctggaggccaagggcgttccc
tctatggtgcagcgtacgctgatccgcccgccgtcgtcgcggctcgggccgctgaccgag
ccggagcgccagaagattcaggccgtgagccccgtggccgggcagtatgacaagccgatc
gaccgcgaatcggcgttcgagatgctggagaagaaggcggcggaggcggcgcgcgcggaa
gaggaagcgcgggaaaacgaggacgcagcgccggccgatgcggggcggggcaggacgcgc
tggaccctgccggatttcgacggcgggggcgaaaagcgggatcgcgacgacgacgacgac
gatttagaggaggactaccgccgccgccggtcgtcccgcacccgttccgcgccgaggaaa
cggacgtcgaaccgccagacggtggcggaggcagcgatcaagtcggtggtgcggtcggtg
ggaagctcgctggggcgggcgctggtgcgcggcgtcctggggagtttgaagagggggggg
tga
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