Aquibium oceanicum: BSQ44_10235
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Entry
BSQ44_10235 CDS
T04603
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
meso
Aquibium oceanicum
Pathway
meso03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
meso00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BSQ44_10235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meso03021
]
BSQ44_10235
03400 DNA repair and recombination proteins [BR:
meso03400
]
BSQ44_10235
Enzymes [BR:
meso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BSQ44_10235
Transcription machinery [BR:
meso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BSQ44_10235
DNA repair and recombination proteins [BR:
meso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BSQ44_10235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF1179
MinE
Motif
Other DBs
NCBI-ProteinID:
APH71702
UniProt:
A0A1L3SQY2
LinkDB
All DBs
Position
2070017..2070424
Genome browser
AA seq
135 aa
AA seq
DB search
MARVTVEDCIDKVENRFELVLLAGHRARQISQGASITIDRDNDKNPVVALREIADETLSP
GDLKEDLIHSLQKHVEVDEPEADAHEMIERSESSPEAAAAAAPEEDEPVTFDRMSEEELL
AGIEGLVPPEKSDDY
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtaaccgttgaagattgtatcgacaaggtcgagaaccgtttcgaactcgtc
ctgctcgccggtcaccgcgcgcgtcagatctcccagggcgcatcgatcaccatcgaccgc
gacaacgacaagaaccccgtcgtagccctgcgcgagatcgccgacgagacgctgtcgccc
ggcgacctcaaggaagacctgatccactcgctgcagaagcatgtcgaggtcgacgagccc
gaggccgacgcgcacgagatgatcgagcgcagcgagagctcgccggaagcagctgccgcc
gccgcgccggaggaggacgagcccgtcaccttcgaccgcatgagcgaggaagagctgctc
gccggcatcgaaggcctcgtgccgccggaaaaaagcgacgactactga
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