KEGG   Aquibium oceanicum: BSQ44_20400
Entry
BSQ44_20400       CDS       T04603                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
meso  Aquibium oceanicum
Brite
KEGG Orthology (KO) [BR:meso00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:meso03400]
    BSQ44_20400
Enzymes [BR:meso01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BSQ44_20400
    5.6.2.6  RNA 3'-5' helicase
     BSQ44_20400
DNA repair and recombination proteins [BR:meso03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BSQ44_20400
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C Cas3-like_C_2 ResIII
Other DBs
NCBI-ProteinID: APH73466
UniProt: A0A1L3SVL0
LinkDB
Position
complement(4172701..4175223)
AA seq 840 aa
MTDQPDLGTEISSARLPQPFIRWFAEKGWSPRAHQIDLLAKAQNGRSALLIAPTGAGKTL
AGFLPSLVDLAERPKRKPGEAFRGVHTLYISPLKALAVDIERNLAKPVAEIGLPVTMETR
TGDTPSHKRQRQKVSPPDILLTTPEQLALLIASKDAARFFSGLRYVVLDELHSLVISKRG
HLLALGLARLRALVPGFQAIGLSATVAEPEELRRWLVSQETRGDMADVVTVGGGAKPQIT
ILESRERVPWSGHSARYAIPEVYEEIRRHRTTLLFVNTRSQAEMLFQELWRVNEDVLPIA
LHHGSLDVGQRRKVEKAMETNALRAIVATSTLDLGIDWGDVDLVVHVGAPKGASRLAQRI
GRSNHRMDEPSKAILVPANRFEVMECRAAIEANYLGAQDTPPLVIGALDVLAQHVMGCAC
AEPFSADELFAEVRSAAPYADLDRRTFDRIVDFVATGGYALRTYERYARIRQTKEGLWRV
SHPRLAQQYRLNVGTIIEAPMLNVRYVRGGRGTASRGGPLLGKVEEYFLESLAPGDTFMF
SGKVLRFEGIRENEAFVSNAAGNDAMVPSYAGGKFPLSTYLADQVRGMLADPDRWQALPD
QVADWLRIQRDKSVLPKHGDLLIETFPRGRRFYMIAYPFEGRLAHQTLGMLLTRRLERAG
AQPLGFVATDYALAIWGLRDLGAMFKTPGLSLGQLFDEDMLGDDLEAWLAESWLLKRTFR
NCAVIAGLIERRHPGQEKTGRQVTVSSDLIYDVLREHEPDHILLQATRADAATGLLDVAR
LGEMLSRIKGRIVHKNLERISPLAVPIMLEIGKESVNGDASDALLGEAADELIEEAMGLD
NT seq 2523 nt   +upstreamnt  +downstreamnt
gtgaccgatcagcccgacctcggaacagagatctcatccgcccgtctgccgcagcccttc
atccggtggttcgcggaaaagggatggtcgccacgcgcgcaccagatcgatcttctggcc
aaggcccagaatggcagatcggcgctgctgatcgcgccgaccggcgccggcaagacgctg
gccggcttcctgccgagcctggtcgatctggcggaacggccgaagcgcaagcctggcgaa
gcgttccggggcgtgcatacgctctacatttcgccgctcaaggccttggcggtcgacatc
gagcgcaacctcgccaagcctgtggcggaaatcggcctgccggtaacgatggagacgcga
accggcgacacgccctcgcacaagcggcagcggcagaaggtatcgccgcccgacatcctg
ctcaccacgcccgagcagcttgcgctcctgatcgcctcgaaggacgcggcgcggttcttc
tccgggctgcgctacgtcgtgctcgacgaattgcattcgctggtgatctccaagcgcgga
catctgctggccctggggctggcgcggctgcgcgcgctcgtgccgggatttcaggcgatc
gggctctcggcgaccgtcgcggagccggaggaattgcgccgatggctcgtctcacaggag
acgcgcggtgacatggccgatgtggtcaccgtcggtgggggcgccaagcctcagatcacc
atcctcgaatcgcgcgagcgcgtgccgtggtcggggcactcggcccgctatgccattccg
gaggtctacgaggagatccgacggcaccgtacgacgcttctgttcgtcaacacccgcagc
caggccgagatgctgttccaggaactgtggcgggtgaacgaggacgttctgccgatcgcg
ctgcaccacggttcgctcgacgtggggcagcggcgcaaggtcgagaaggcgatggagacg
aacgccctgcgcgccatcgtcgccacgtccacgctcgacctcggcatcgactggggcgac
gtcgatctcgtggtgcatgtcggggcgccaaagggcgcgagccggctcgcccagcgcatc
ggacgctcgaaccaccgcatggacgagccgtcaaaggcgatcctggtgccggccaaccgc
ttcgaggtgatggaatgccgcgccgcgatcgaggcgaactatctcggcgcgcaggatacg
ccgccgctggtgatcggcgcgctcgacgtgctggcccagcacgtgatgggctgtgcctgc
gccgaacccttctcagccgacgaactcttcgctgaggtgaggtcggccgcaccctatgcg
gacctcgaccgccggacgttcgaccggatcgtcgacttcgtggcgaccggcggatacgcg
cttcgcacctacgagcgatatgcgcggatcaggcagacgaaggagggactgtggcgggtc
agccatccccgcctcgcgcagcagtatcgattgaacgtcggcacgatcatcgaggcgccg
atgctcaacgtgcgctacgtccgcggcgggcgcggcaccgcctcgcgcggcggcccgttg
cttggcaaggtcgaggagtactttctcgaatcgctcgcgcccggcgacacgttcatgttc
tccggcaaggtgctccgcttcgaaggcatccgcgagaacgaggccttcgtctccaacgcc
gccggaaacgatgcgatggtgccctcatacgccggcggcaagtttccgctttccacttat
ctcgccgaccaggtgcgcggcatgcttgccgatcccgaccggtggcaggccctgccggac
caggtcgccgactggctgcgtatccagcgcgacaagtccgtgttgccgaagcacggggac
ctgctcatcgagacgtttccgcgcggcaggcgcttctacatgatcgcctatcccttcgag
gggcggctagcgcaccagacgctcggcatgctcctgacgcgccggctggaacgcgccggg
gcgcagccgctcggtttcgtcgccacggactacgcgctggccatctggggactacgagac
ctgggcgcgatgttcaagacgccgggactgtcgctcgggcagctgttcgacgaggacatg
ctgggcgacgatctcgaggcatggctcgccgagagctggctgctcaagcgcaccttccgc
aattgcgccgtcattgccgggttgatcgagcggcgccatccggggcaggagaagaccggc
cgccaggtcaccgtctcgtccgacctgatctacgacgttctgcgcgagcacgagcccgac
cacatcctcctgcaggcgacgcgggccgatgcggcgaccggtctgctggacgtcgcccgg
ctcggcgaaatgctgtcgcggatcaaggggcgaatcgtgcataagaacctggagcggatt
tcgccgctcgcggtcccgatcatgctggagatcgggaaggaatcggtaaatggcgacgcc
agcgacgcgttgctcggcgaagcggcggacgaactgatcgaggaggccatgggcctcgac
tga

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