Aquibium oceanicum: BSQ44_22470
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Entry
BSQ44_22470 CDS
T04603
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
meso
Aquibium oceanicum
Pathway
meso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSQ44_22470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meso03400
]
BSQ44_22470
Enzymes [BR:
meso01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BSQ44_22470
DNA repair and recombination proteins [BR:
meso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BSQ44_22470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
APH73835
UniProt:
A0A1L3SX00
LinkDB
All DBs
Position
4609356..4610849
Genome browser
AA seq
497 aa
AA seq
DB search
MSALPKPLPRITIRLAGQTDFDGWRKAARALAMREIPADQVGWAVSGAASADLFDGAAPS
RDAAPDGGTAFTVPRSFVEAAEAVICHSDAERFSLLYRILLRLRREPDLLKIASDPDVRR
LEAMAKAVRRDIHKMRAFVRFRRIGSGADERHVAWFESLHFIVERNAPFFVRRFTGMRWT
ILTPYASADWDGERLAIGPGATRADAPSEDDAEALWRTYFSSIFNPARLKVKAMQAEMPK
KYWRNLPEASLIPDLIRGAEDKARDMIQKLPTEPAPHHAKVKARHWPEPDVEPGPDDEGA
NASTIPELRAAAEGCRRCPLWRDATQTVFGEGPEKAKVVFVGEQPGDQEDLAGKPFVGPA
GKMLDAVLAEAEVDRSEVYVTNGVKHFKFEPRGKRRIHAKPNAGEVKACRWWVDKELAIL
KPTLAVALGATAAQSLLGKTVPITKMRGQVVEREDGLRVFLTIHPSYILRIPEPADKEAE
RGRFLADMRAVRELMAA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcacttccgaaaccccttccccgcatcaccatccggctcgccggccagaccgat
ttcgacggctggcggaaggctgcccgcgcgctggcgatgcgcgagatccccgccgatcag
gtaggctgggcggtgtcaggcgccgcgagcgccgatctcttcgacggcgccgcgccatcg
cgcgacgcggctccggacggcgggacggcattcaccgtgccgcgctctttcgtggaggcg
gccgaagcggtgatctgccactcggatgccgagcgtttttcactgctctaccgcattctg
ctgcggctgcgccgagaaccggaccttttgaagatcgcctccgatcccgacgtgcggcgt
ctggaggcgatggcgaaggccgtgcgccgggacatccacaagatgcgcgccttcgtgcgc
ttccggcgcatcggctcgggggcagacgagcgccacgtcgcctggttcgagtcgctgcat
ttcatcgtcgagcgcaacgcgcccttcttcgtgcgccgcttcaccggcatgcgctggacg
atcctcacgccctatgcctcggccgactgggacggcgagcgcctggcgatcggccccggc
gccacccgcgccgacgcgccgtccgaggacgatgccgaagcgctgtggcgcacctatttt
tcctcgatcttcaatcccgcgcggctgaaggtgaaggccatgcaggccgagatgccgaag
aagtactggcggaaccttcccgaagcctcgctcattccggacctgatccgcggtgccgaa
gacaaggccagggacatgatccagaaactgccgaccgaacccgccccgcaccatgccaag
gtgaaggcgcgccactggccggaaccggatgtcgagccgggtcccgacgacgaaggcgcg
aacgccagcacaatccccgaactgcgcgccgcggcggaaggctgccgccgctgcccgctc
tggcgcgatgccacccagaccgtgttcggcgaaggaccggaaaaagcgaaggtcgtgttt
gtcggcgagcagccgggcgaccaggaggaccttgccggaaagcccttcgtcggcccggcg
gggaaaatgctggacgccgtgctagcggaagccgaggtggaccgctcggaagtctatgtc
acgaatggcgttaaacacttcaaattcgagccgcgcggcaagcgccgaatccacgccaag
ccgaacgccggggaggtgaaggcctgccgctggtgggtcgacaaggaactggcgatcctg
aagcccaccctcgccgtggcgctcggcgcaaccgccgcgcagtcgctgctcggcaagacg
gtccccatcacgaagatgcgcggccaggtggtcgaacgcgaagacggcctgcgcgtcttc
ctcaccatccacccctcctacatcctgcgcatcccggaaccggccgacaaggaggcggag
cgcggaagattcttggcggacatgagggcggtcagggaactgatggcggcgtag
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