Mesorhizobium sp. Pch-S: C1M53_00200
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Entry
C1M53_00200 CDS
T05918
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mesp
Mesorhizobium sp. Pch-S
Brite
KEGG Orthology (KO) [BR:
mesp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesp03032
]
C1M53_00200 (topA)
03400 DNA repair and recombination proteins [BR:
mesp03400
]
C1M53_00200 (topA)
Enzymes [BR:
mesp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C1M53_00200 (topA)
DNA replication proteins [BR:
mesp03032
]
Prokaryotic type
DNA Topoisomerases
C1M53_00200 (topA)
DNA repair and recombination proteins [BR:
mesp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C1M53_00200 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QAZ41624
UniProt:
A0A4P6H275
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Position
43933..46494
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AA seq
853 aa
AA seq
DB search
MDIVVVESPNKVKSINKYLGRNYKVLASFGHVRDLPAKDGSVKPDEDFAMSWAVDTASAK
RLTDIAKAVKEADGLILATDPDREGEAIAWHVLEVLKQKKVLKDKPVRRVAFNSITKQAV
LDAIASPREIDPPLVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRFVCDR
EAEIERFVREEYWQIAAVLGTPRNESFEARLTAYEGKKLQKLDISSQVMADDIKAMLEGA
SFRALSVEAKPTKRNPAPPFTTSTLQQAASSRLGFSAQRTMQVAQRLYEGMDIGGETAGL
ITYMRTDGVQMAPEAISGARDTIAKEFGARYLPEKPRHYTTKAKNAQEAHEAIRPTDFNR
TPAEMRKYLDSDQARLYEIIWQRAIASQMQPAEIERTTVEIEARNGAKVAGLRAVGSVTR
FDGFIAAYTDQKDEDSEDEENRRLPEIRAEETLKREQVNATQHTTEPPPRYSEASFIKKM
EELGIGRPSTYVATLKTLEDRDYIKIENRKLMPQSKGRLVTAFMEGFFEHYVEYDFTASL
EEKLDEISDGKLAWKDVLRDFWKDFSGAVDGIKELRVTDVLDALNEELAPLVFPEREDGS
NPRICPKCGNGNLSLKLGKFGAFVGCSNYPECGYTRQLDGQNGNGENGAVEDGTKLLGKD
PYTAEEITLRSGRFGPYVQRGEGKDAKRSSLPKGWTAATIDHEKALALLSLPRDVGQHPE
TGKMISAGLGRYGPFILHDGTYANVESIEDVFSIGLNRAVSVLAEKQSKGPGGRNGGTPA
ALKDLGDHPAGGGKITVRDGRYGAYVNFGKINATLPKGKDPQTVTVDEAVALIAEKEAKG
GGGKKPFRGKKKG
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgtcgtcgtcgagtcgccgaacaaggttaaaagcatcaacaaatatctcggc
cggaactataaggttctggcctccttcggccatgtccgtgacctgcccgccaaggatggt
tcggtgaaacccgacgaggatttcgccatgtcctgggccgtcgacacggcttcagcgaag
cgattgaccgatatcgccaaggccgtgaaggaagctgacggcctgatccttgcaaccgac
ccggatcgcgaaggcgaagccattgcctggcacgttctggaagtcctgaagcagaagaag
gtgctgaaggacaagccggtcaggcgcgtcgcgttcaactccatcaccaagcaggcggtg
ctcgatgccatcgccagcccgcgcgagatcgatccaccgctggtggacgcctatctggcg
cgccgcgccctggattatctggtcggcttcacgctttcaccggtgttgtggcgcaaactg
ccaggcgcccgttctgccggccgcgtgcagtcggtggcgctgcgtttcgtctgcgatcgc
gaggccgagatcgagcgcttcgtgcgcgaggaatactggcagatcgccgccgttctgggc
accccgcgcaacgagagcttcgaagccaggctgaccgcctatgaaggcaagaagctgcag
aagctcgacatttcctcgcaggtcatggccgacgacatcaaggcgatgctggagggcgcg
tccttccgcgcgctgtctgtcgaagccaagccgaccaaacgcaatcccgcaccgcccttc
accacctcgacgctgcagcaggccgcctcgtcgcgcctcggtttctcggcccagcgcacc
atgcaggttgcccagcgcctctatgaaggcatggacatcggcggcgagacggccggcctg
atcacctacatgcgtaccgacggcgttcagatggcacccgaggcgatttcgggagcccgc
gacaccatcgccaaggaattcggcgccagatatctgccggaaaagccgcgccactacacg
accaaggccaagaacgcgcaggaagctcacgaagcgatccggccgaccgatttcaaccgc
acgccggccgagatgcgcaaatatctcgattctgaccaggcgcggctctacgagatcatc
tggcagcgggcgatcgccagccagatgcagccggccgaaatcgaacgcaccacggtcgag
atcgaagcacgcaatggcgcgaaagtcgccggcctgcgcgcggtgggttccgtcacccgc
ttcgacggctttatcgcagcctataccgaccagaaggacgaggattcggaagacgaggaa
aaccgccgtctgcccgaaatccgcgccgaggagacgctgaagcgcgagcaggtcaacgcc
acccagcacacgaccgagccgccgccccgctactccgaagcctcgttcatcaagaagatg
gaagagctcggcatcggccgtccctcgacctatgtcgcgacattgaagacgctggaagac
cgcgactacatcaagatcgagaaccgcaagctgatgccccagtccaagggccggctggtt
accgccttcatggaaggcttcttcgagcactatgtcgaatatgacttcaccgcctctctc
gaagagaagctcgacgagatttccgacggcaagctcgcctggaaggacgtcttgcgcgat
ttctggaaggatttctccggcgctgtcgacggcatcaaggaactgcgtgtcaccgacgtg
ctcgacgcgctcaacgaagagctggcgccgctggtcttccccgagcgcgaggatggctcc
aatccgcgcatctgcccgaagtgcggcaacggcaacctgtcgctgaaactcggcaagttc
ggcgccttcgtcggttgctcgaactaccccgaatgcggctatacgcgccagctcgacggc
cagaacggcaatggcgagaacggcgcggtcgaagacggcaccaagctgctcggcaaggat
ccgtacaccgccgaggagatcacgctgcgctccgggcgtttcggtccctatgtgcagcgc
ggcgaaggcaaggatgccaagcgttccagcctgcccaagggctggactgccgccacgatc
gatcatgagaaggcgctggcgctgctgtcgctgccgcgcgacgtcggccagcatcccgag
accggaaagatgatttcggccggccttggccgctacggcccgttcatcctgcacgacggc
acctatgccaatgtcgaaagcatcgaggatgtgttctccatcggcctcaaccgcgccgta
tcggtgctggcggagaagcagtcgaagggaccaggcggacgcaatggcggcacgccggca
gcactgaaggatctcggcgaccaccctgccggcggtggcaagatcacggtgcgtgacggc
cgctacggcgcctatgtgaatttcggcaagatcaacgcgaccctgcccaagggcaaggat
ccgcagacggtgacggtggacgaagccgtcgcgctgatcgccgagaaggaagccaagggc
ggaggcggcaagaagccgttccgcggcaagaagaagggatag
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