Mesorhizobium sp. Pch-S: C1M53_00540
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Entry
C1M53_00540 CDS
T05918
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
mesp
Mesorhizobium sp. Pch-S
Pathway
mesp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mesp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C1M53_00540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesp03021
]
C1M53_00540
03400 DNA repair and recombination proteins [BR:
mesp03400
]
C1M53_00540
Enzymes [BR:
mesp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C1M53_00540
Transcription machinery [BR:
mesp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C1M53_00540
DNA repair and recombination proteins [BR:
mesp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C1M53_00540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
Motif
Other DBs
NCBI-ProteinID:
QAZ41681
UniProt:
A0A4P6GZG7
LinkDB
All DBs
Position
complement(109567..109968)
Genome browser
AA seq
133 aa
AA seq
DB search
MARVTVEDCIDKVDNRFELVLLAGHRARQISQGAMITVPRDNDKNPVVALREIADETLSP
GDLKEDLIHSLQKHVEVDEPEAPEAEAITDQTGTAVAVDADEPEENITFDRMSEEDLLAG
IEGLVAPEKNDDY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtaaccgttgaagattgcatcgacaaggtcgacaaccgcttcgagctggtg
ctgttggccggtcaccgcgcccgccagatcagccagggtgcgatgatcaccgtgccgcgc
gacaacgacaagaacccggtcgtggcgctgcgcgagatcgccgatgagacgctttcgccc
ggcgacctcaaggaagacctgatccattcgctgcagaagcatgtcgaggtcgacgagccg
gaagcaccggaagccgaggcgatcaccgatcagaccggtaccgctgttgctgtcgacgcc
gacgagccggaagagaacatcactttcgatcgcatgtcggaagaggatctgctggccggt
atcgaaggcctggtggcaccggaaaagaacgacgattattga
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