Mesorhizobium sp. Pch-S: C1M53_01970
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Entry
C1M53_01970 CDS
T05918
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mesp
Mesorhizobium sp. Pch-S
Pathway
mesp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mesp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1M53_01970 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesp03019
]
C1M53_01970 (pnp)
03016 Transfer RNA biogenesis [BR:
mesp03016
]
C1M53_01970 (pnp)
Enzymes [BR:
mesp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C1M53_01970 (pnp)
Messenger RNA biogenesis [BR:
mesp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C1M53_01970 (pnp)
Transfer RNA biogenesis [BR:
mesp03016
]
Prokaryotic type
tRNA degradation factors
C1M53_01970 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QAZ41918
LinkDB
All DBs
Position
complement(417546..419693)
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AA seq
715 aa
AA seq
DB search
MFKQHKVEIEWGGRPLILETGKIARQADGAVLATYGETVVLATVVSAKEPKPGFDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSEKETLVSRLIDRPIRPLFADGYKNDTQIVVTVVQH
DLENDPDILSIVATSAALTLSGVPFMGPIGGARVGYINGEYVLNPHIDEMQESKLDLVVA
GTSDAVLMVESEAKELGEELMLGAVMFGHKAFQPVIEAIIKLAEVAAKDPRDFTPPSFGD
LEKEMLGVAESDLRAAYKITDKQARYAAVDAAKAKVKAAFTPAEGEEAKYSSEQVATVFK
ELQAKIVRWNILDTGSRIDGRDLKTVRSIVSEVGILPRTHGSALFTRGETQAIVVATLGT
GEDEQYVDSLTGMYKETFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPSA
EQFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLIKEDERFAVL
SDILGDEDHLGDMDFKVAGTANGITSLQMDIKIDGITEEIMKVALGQAKDGRLHILGEMA
KAISEGRKELGEFAPRIEVMHIPTDKIRDVIGSGGKVIREIVEKTGAKINIEDDGTVKIA
SSNAKEIEAAKKWIHTIVAEPEVGEIYEGTVVKTADFGAFVNFFGPRDGLVHISQLSDQR
VAKTTDVVKEGDKVWVKLMGFDERGKVRLSMKIVDQETGKEIAREKKAEGEETAA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagcaacacaaagtggaaatcgaatggggcggccgtccgctcatcctcgagacc
ggcaagatcgcgcgccaggctgatggcgccgtgctagcgacttatggcgagaccgtggtt
ctggccaccgtcgtttcggccaaggagcccaagcccggtttcgatttctttccgctgacc
gtcaactaccaggaaaagacctacgccgccggcaagatcccgggtggctacttcaagcgt
gaaggtcgtccgagcgaaaaggaaacgctggtttcccgcctgatcgaccgcccgatccgt
ccgctcttcgccgacggctacaagaacgacacccagatcgtcgtcaccgttgtgcagcac
gatctcgagaacgatccggacatcctgtcgatcgttgccacttccgcagcgctgacactc
tcgggcgttccgttcatgggtccgattggtggtgcccgcgtcggctacatcaacggcgaa
tatgtgcttaacccgcatatcgacgagatgcaggaatccaagctcgacctcgtggtcgct
ggtaccagcgatgcggtgctgatggtcgaatcggaagccaaggaactgggcgaagagctg
atgctcggcgctgtcatgttcggccacaaggctttccagccggtgatcgaggcgatcatc
aagctggccgaggttgccgccaaggatccgcgcgacttcaccccgccgtccttcggcgat
ctggagaaggaaatgctcggcgtagccgagagcgacctgcgcgccgcttacaagatcact
gacaagcaggcccgctatgccgccgtcgatgccgccaaggccaaggtcaaggctgctttc
accccggccgaaggcgaggaagcgaagtattcgtccgagcaggttgccaccgtgttcaag
gaactccaggccaagatcgtgcgctggaacatcctcgataccggttcgcgcatcgatggt
cgtgatctcaagactgtccgttcgatcgtttcggaagtcggcatcctgccgcgcacccac
ggctcggcgctgttcacccgcggcgagacccaggcgatcgtggttgccacgctcggcacc
ggcgaagacgagcagtatgtcgactcgctgactggcatgtacaaggagaccttcctcctt
cactacaacttcccgccctattcggtcggcgaaaccggccgcatgggttcgcctggccgt
cgtgaaatcggtcacggcaagctggcctggcgcgccattcatccgatgctgccttcggcg
gaacagttcccgtacacgctgcgcgtcgtctccgagatcaccgagtccaacggctcgtcc
tcgatggccaccgtctgcggtacctcgctggcgctgatggatgccggcgtgccgctggcc
aagccggtcgccggtatcgccatgggcctgatcaaggaagatgagcgttttgccgtgctt
tccgacatcctgggcgacgaggatcatctcggcgacatggatttcaaggtggctggcact
gcgaacggcatcacctcgctgcagatggacatcaagatcgatggcatcaccgaggagatc
atgaaggtggcgctgggtcaggccaaggacggccgcctgcacatcctcggcgaaatggcc
aaggccatctccgaaggccgcaaggaactcggcgagttcgcgccgcgcatcgaggtgatg
cacatcccgaccgacaagatccgtgacgtcatcggctcgggcggcaaggtcatccgcgaa
atcgtcgaaaagaccggcgccaagatcaacatcgaggacgacggcaccgtgaagatcgct
tcgtcgaacgccaaggaaatcgaggcggcgaagaagtggatccacaccatcgtggccgag
ccggaagtcggcgagatctacgagggcacggtcgtcaagactgccgacttcggtgcgttc
gtgaacttcttcggcccgcgtgacggcctcgtgcacatctcgcagctgtccgaccagcgc
gtcgccaagaccaccgatgtggtcaaggaaggcgacaaggtctgggtcaagctgatgggc
ttcgatgagcgcggcaaagtccgtctttcgatgaagatcgttgaccaggagactggcaag
gaaatcgcccgcgaaaagaaggcggaaggcgaagaaaccgccgcctga
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