Mesorhizobium sp. Pch-S: C1M53_01985
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Entry
C1M53_01985 CDS
T05918
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mesp
Mesorhizobium sp. Pch-S
Brite
KEGG Orthology (KO) [BR:
mesp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesp03016
]
C1M53_01985
Enzymes [BR:
mesp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C1M53_01985
Transfer RNA biogenesis [BR:
mesp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C1M53_01985
Prokaryotic type
C1M53_01985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QAZ41921
LinkDB
All DBs
Position
complement(421692..422648)
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AA seq
318 aa
AA seq
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MARRGKKKGRPVSGWLILDKPVGMGSTEAVSKVKWLFQAEKAGHAGTLDPLASGMLPIAL
GDATKTVPYVQDGAKIYRFTVAWGEERSTDDLEGPVTKSSDMRPSEADIRALLPNYTGVI
MQTPPQFSAIKIAGERAYDLARDGETVEIPAREVEIGRLDIVEHGSDRTIFEVECGKGTY
VRSLARDMGRDLGCFGHIADLRRTEVDPFTSEDFVTIAELEAALPPAAEGDDAPFSDTER
HAALDDFLIDTAAALECLPQVAISDDAATKIRLGNSVIIRGRDAPLEAEEACATARGKLV
AIGAIEQGMFKPKRVFAG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgcggtaagaagaagggccgaccggtttccggctggctgatcctggacaag
ccggtcggcatggggtcgaccgaagcggtgtcgaaggtgaaatggctgttccaggcggaa
aaggccggacatgccggcacgctcgatccgctggcatccggcatgctgccgatcgctctc
ggcgatgccaccaagaccgtgccctatgtgcaggatggcgccaagatctaccgcttcacc
gtcgcctggggggaggagcgcagcaccgacgatctggaaggtccggtgacaaagagttcg
gacatgcgtccgagcgaggcggatatccgcgcgctgctgcccaactacaccggcgttatc
atgcagacgccgccccagttctccgccatcaagatcgccggcgagcgcgcctatgatctc
gctcgtgatggagagacggtcgagattccggcacgcgaggtcgagatcggtcggctcgat
atcgttgaacatggcagtgaccgcaccattttcgaggtcgaatgcggtaagggcacctat
gtgcgttcactggcgcgcgacatgggacgcgacctcggctgcttcggtcatatcgcggac
ttgcgtcgcaccgaggttgatccctttacatccgaggactttgtcaccatcgctgaactg
gaggcggcgctgccacctgcggcggaaggtgacgatgccccgttctccgataccgaacgc
catgccgccctcgacgatttcctgatcgacaccgctgccgcgctggaatgcctgccgcag
gtcgccatcagcgatgatgcggccacgaagatcaggcttggtaattccgtcatcatccgc
ggtcgcgatgcgccgctggaggcggaagaagcctgtgcgaccgcacgtggcaagctggtc
gccattggcgccatcgagcagggtatgttcaagcccaagcgggtttttgcgggctga
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