Mesorhizobium sp. Pch-S: C1M53_03935
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Entry
C1M53_03935 CDS
T05918
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mesp
Mesorhizobium sp. Pch-S
Brite
KEGG Orthology (KO) [BR:
mesp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesp03032
]
C1M53_03935
03400 DNA repair and recombination proteins [BR:
mesp03400
]
C1M53_03935
Enzymes [BR:
mesp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C1M53_03935
DNA replication proteins [BR:
mesp03032
]
Prokaryotic type
DNA Topoisomerases
C1M53_03935
DNA repair and recombination proteins [BR:
mesp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C1M53_03935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QAZ46915
UniProt:
A0A4P6HEA9
LinkDB
All DBs
Position
complement(834568..835602)
Genome browser
AA seq
344 aa
AA seq
DB search
MRDGAEAAHAISLRYVADGEPGIHRRRAGRGFRYEDARGHKVGSQSDLARIRSLAIPPAW
TKVWICRDDKGHIQATGRDARGRGQYLYHSDWLQMRDEAKFSSLIPFARALPSMRQQVDR
DLRRHGLPRERVLAVVVWLLDNTLIRIGNPAYARENGSFGLTTLRDRHVDIAGSTLRFVF
KGKSGKEWKLKLTDRRIAGIVRHTQDLPGQTLFQYLDENGDRSAVTSHAVNAYIGDICGF
SSKHFRTWGATVQALSLFAQTPLPETGKGVAELRNHVIDKVAARLGNTRAVCRSGYIHPR
IIASWESGELSKELKTAGRLRRKDFLDRDEARTLAWLLLVETQA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggatggtgccgaagcggcgcatgcaatttcgctgcgctatgtagcggatggcgag
cccggcatccatcggcgccgggcagggcgtggatttcgctacgaggatgctagaggccac
aaggtcggcagccaatccgacctggcgcgtatccgttcgctcgcgataccgccagcctgg
accaaggtgtggatctgtcgcgacgacaagggacatatccaggcaaccggccgggacgcc
cgcggccgtggccagtatctctatcattcggactggctccagatgcgcgacgaagcaaaa
ttttcgagcctgatcccgtttgcccgggcgcttccttcgatgcgtcagcaggtcgatcgt
gacctgcgccggcatggcctgccgcgcgagcgcgtattggccgtggtcgtctggctgctc
gacaacaccctgatcaggatcggcaatccggcctatgcgcgggagaatggcagtttcggc
ctgacgacgctgcgggacagacatgtcgacatcgccggctcgaccctacgctttgtcttc
aagggcaagtccggcaaagaatggaagctgaaactgactgaccggcgtatcgcaggcatc
gttcgccacacgcaggatctgccgggccagaccctgttccaatatctggacgagaacggc
gaccgctcggcggtgacatcgcatgccgtcaacgcctatatcggcgacatctgcggtttc
agttcgaagcatttcaggacctggggcgccacggtgcaggccctgtccctgttcgcgcag
acacccttgcccgaaaccgggaagggagtagcagagcttcgcaaccacgtcatcgacaag
gtggccgcaagacttggcaacacacgcgcggtctgtcgcagcggctatatccatccccgg
atcatcgcgtcatgggaaagcggagagttgtcgaaagaactgaaaacggcggggcggctc
aggcggaaggattttctcgaccgcgatgaagcccggacgttggcgtggctgcttctggtg
gagacgcaggcctag
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