Mesorhizobium sp. Pch-S: C1M53_11630
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Entry
C1M53_11630 CDS
T05918
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mesp
Mesorhizobium sp. Pch-S
Pathway
mesp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mesp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1M53_11630 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesp03021
]
C1M53_11630 (rho)
03019 Messenger RNA biogenesis [BR:
mesp03019
]
C1M53_11630 (rho)
Transcription machinery [BR:
mesp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
C1M53_11630 (rho)
Messenger RNA biogenesis [BR:
mesp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C1M53_11630 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
OB_RNB
AAA_25
S1CSD-TOTE-2
NACHT
AAA
ANAPC4_WD40
Motif
Other DBs
NCBI-ProteinID:
QAZ43517
LinkDB
All DBs
Position
2521153..2522415
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AA seq
420 aa
AA seq
DB search
MQEMKLQEFKNKKPTDLIAFAESLEVENASVMRKQELMFAILKKLAAQDIEIIGDGVVEV
LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRSPKEGERYFALLKVN
TINFDDPEKIRHKIHFDNLTPLYPNERLKMEIEAPTKDLSARVIDLVAPLGKGQRGLIVA
PPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAVR
HVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPK
RFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIYPAM
DILKSGTRKEDLLVQRQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKTNGDFFDSMNT
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaatgaaactccaagaattcaagaacaagaaaccgaccgatctgatcgccttt
gccgaatcgctcgaggtcgagaacgccagcgtgatgcgcaagcaggagctgatgttcgcc
atcctcaagaagctggccgcgcaggacatcgagatcatcggtgatggcgtcgtcgaggtg
ctgcaggacggcttcggcttcctgcgctcggccaacgccaactatctgccaggcccggat
gatatctacatctcgccctcgcagatccgccgcttctcgctgaagaccggcgatacggtc
gaagggccgatccgcagcccgaaggaaggcgagcgctatttcgcgctgctcaaggtcaac
accatcaatttcgacgatccggagaagatccggcacaagatccacttcgacaacctgacg
ccgctctatccgaacgagcgtctgaagatggaaattgaagccccgaccaaggacctgtca
gcgcgtgtcatcgatctggtggcgccgctcggcaaaggccagcgtggcctgatcgtcgcg
ccgccgcgtaccggtaagacggtgctgctgcagaatatcgcccattccatcaccgctaat
cacccggaatgctatcttatcgtgcttctgatcgacgaacgtccggaagaagtgaccgac
atgcagcgttcggtgaagggcgaggtggtttcctcgacgttcgatgagccggccgttcgc
cacgtgcaggttgccgaaatggtcatcgaaaaggccaagcgccttgtcgagcatggccgt
gacgtcgtcatcctgcttgattcgatcacccgcctcggccgtgcctacaacaccgtggtg
ccgtcatccggcaaggtgctgaccggcggtgtcgatgccaacgcgctgcagcgtccgaag
cgtttcttcggtgccgcccgcaacatcgaggaaggtggttcgctgaccatcatcgcgacc
gcgctgatcgataccggcagccgcatggacgaagtgatcttcgaagagttcaagggcacc
ggcaactcggaaatcgtgctcgaccgcaaggttgccgacaagcgcatctacccggcgatg
gatatcctcaagtcgggcacccgcaaggaagacctgctggtgcagaggcaggatctgcaa
aagattttcgtgctgcgccgcatcctcgcgccgatgggcacgaccgacgcgatcgagttc
ctcatcgacaagctgaagcagaccaagaccaatggcgacttcttcgattcgatgaacacc
tga
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